Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-600052), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
661 Tdc2-F-000027 VII 0.75
759 VGlut-F-600257 III 0.71
468 VGlut-F-600670 III 0.65
76 fru-M-300240 III 0.64
874 Trh-F-100011 III 0.60
209 Trh-M-600023 III 0.60
173 Trh-M-000051 III 0.59
1006 VGlut-F-500043 III 0.58

Cluster composition

This cluster has 13 neurons. The exemplar of this cluster (VGlut-F-600052) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-600052 15055 DvGlutMARCM-F1394_seg1 VGlut-Gal4 F 39600.35 1.00
VGlut-F-700400 8763 DvGlutMARCM-F003584_seg001 VGlut-Gal4 F 20540.10 0.64
VGlut-F-800209 9003 DvGlutMARCM-F003547_seg002 VGlut-Gal4 F 12783.33 0.50
VGlut-F-600539 9353 DvGlutMARCM-F003186_seg001 VGlut-Gal4 F 21540.39 0.65
VGlut-F-400660 10223 DvGlutMARCM-F003043_seg001 VGlut-Gal4 F 19651.73 0.61
VGlut-F-600194 11756 DvGlutMARCM-F002327_seg001 VGlut-Gal4 F 18110.79 0.60
VGlut-F-600240 11842 DvGlutMARCM-F002395_seg001 VGlut-Gal4 F 22154.94 0.65
VGlut-F-400490 13066 DvGlutMARCM-F2089_seg1 VGlut-Gal4 F 21062.74 0.64
VGlut-F-300135 14416 DvGlutMARCM-F711_seg1 VGlut-Gal4 F 26354.57 0.62
VGlut-F-300298 15252 DvGlutMARCM-F1572_seg1 VGlut-Gal4 F 31523.76 0.68
VGlut-F-400164 15581 DvGlutMARCM-F707-X2_seg2 VGlut-Gal4 F 19970.21 0.64
VGlut-F-300049 15924 DvGlutMARCM-F320_seg1 VGlut-Gal4 F 11398.21 0.44
VGlut-F-200089 16096 DvGlutMARCM-F480_seg1 VGlut-Gal4 F 24662.41 0.55