Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-600670), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
759 VGlut-F-600257 III 0.21
173 Trh-M-000051 III 0.21
661 Tdc2-F-000027 VII -0.05
1006 VGlut-F-500043 III -0.08
209 Trh-M-600023 III -0.08

Cluster composition

This cluster has 9 neurons. The exemplar of this cluster (VGlut-F-600670) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-600670 7210 DvGlutMARCM-F003569_seg001 VGlut-Gal4 F 159255.60 1.00
VGlut-F-900000 10746 DvGlutMARCM-F022_seg1 VGlut-Gal4 F 104530.29 0.66
VGlut-F-400614 10930 DvGlutMARCM-F002826_seg001 VGlut-Gal4 F 107272.83 0.64
VGlut-F-200454 11656 DvGlutMARCM-F002229_seg001 VGlut-Gal4 F 103063.08 0.66
VGlut-F-100258 11741 DvGlutMARCM-F002312_seg001 VGlut-Gal4 F 103022.31 0.66
VGlut-F-300388 13092 DvGlutMARCM-F2115-montage_seg1 VGlut-Gal4 F 102116.04 0.66
Trh-F-000025 14032 TPHMARCM-317F-montage_seg1 Trh-Gal4 F 104667.83 0.66
VGlut-F-400013 15674 DvGlutMARCM-F089-montage_seg1 VGlut-Gal4 F 104065.19 0.63
VGlut-F-800007 15750 DvGlutMARCM-F158_seg1 VGlut-Gal4 F 102436.90 0.64