Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-100079), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
88 fru-M-500118 XVI 0.58
816 VGlut-F-500310 XVI 0.56
79 fru-M-300247 XVI 0.53
599 VGlut-F-500640 XVI 0.53
979 VGlut-F-400141 XVI 0.53
630 fru-F-500012 XVI 0.51
101 fru-M-500143 XVI 0.50

Cluster composition

This cluster has 39 neurons. The exemplar of this cluster (VGlut-F-100079) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-100079 14735 DvGlutMARCM-F995_seg1 VGlut-Gal4 F 8792.49 1.00
Cha-F-100360 3928 ChaMARCM-F001585_seg002 Cha-Gal4 F 5426.83 0.64
Cha-F-200223 5072 ChaMARCM-F001141_seg001 Cha-Gal4 F 4871.00 0.53
Cha-F-600157 5119 ChaMARCM-F001176_seg001 Cha-Gal4 F 5317.78 0.63
Cha-F-400158 5333 ChaMARCM-F000709_seg001 Cha-Gal4 F 5414.91 0.63
VGlut-F-800315 5911 DvGlutMARCM-F004577_seg001 VGlut-Gal4 F 5420.12 0.63
Trh-F-900012 5998 TPHMARCM-711F_seg3 Trh-Gal4 F 5177.33 0.60
fru-F-700121 6228 FruMARCM-F001168_seg001 fru-Gal4 F 5161.61 0.61
fru-F-500169 6242 FruMARCM-F001228_seg002 fru-Gal4 F 5230.18 0.58
fru-F-500172 6268 FruMARCM-F001302_seg002 fru-Gal4 F 4918.78 0.55
fru-F-500179 6317 FruMARCM-F001441_seg002 fru-Gal4 F 5642.15 0.64
Cha-F-000104 7176 ChaMARCM-F000629_seg001 Cha-Gal4 F 5087.47 0.57
Cha-F-700124 7644 ChaMARCM-F000476_seg001 Cha-Gal4 F 5082.79 0.56
fru-F-500106 7760 FruMARCM-F000661_seg002 fru-Gal4 F 4739.79 0.50
VGlut-F-200533 7938 DvGlutMARCM-F003773_seg001 VGlut-Gal4 F 4968.36 0.54
Cha-F-000037 8078 ChaMARCM-F000144_seg001 Cha-Gal4 F 4841.08 0.55
Cha-F-700043 8128 ChaMARCM-F000173_seg001 Cha-Gal4 F 3732.91 0.46
Cha-F-200047 8237 ChaMARCM-F000234_seg001 Cha-Gal4 F 4903.61 0.52
Cha-F-200054 8244 ChaMARCM-F000238_seg001 Cha-Gal4 F 5019.50 0.58
VGlut-F-500567 8555 DvGlutMARCM-F003124_seg001 VGlut-Gal4 F 4980.16 0.59
VGlut-F-400763 8681 DvGlutMARCM-F003723_seg001 VGlut-Gal4 F 5672.11 0.67
VGlut-F-500652 9043 DvGlutMARCM-F003366_seg001 VGlut-Gal4 F 5404.28 0.63
VGlut-F-500660 9059 DvGlutMARCM-F003379_seg002 VGlut-Gal4 F 5291.07 0.60
Gad1-F-800027 9495 GadMARCM-F000388_seg001 Gad1-Gal4 F 5306.41 0.60
Gad1-F-000051 9576 GadMARCM-F000447_seg001 Gad1-Gal4 F 5474.34 0.61
Gad1-F-300117 9596 GadMARCM-F000464_seg002 Gad1-Gal4 F 4958.46 0.57
fru-F-500035 9916 FruMARCM-F000499_seg002 fru-Gal4 F 5264.45 0.56
Gad1-F-500022 10506 GadMARCM-F000155_seg001 Gad1-Gal4 F 5416.01 0.61
Gad1-F-500009 10530 GadMARCM-F000063_seg001 Gad1-Gal4 F 5174.95 0.60
Gad1-F-800017 11307 GadMARCM-F000280_seg001 Gad1-Gal4 F 4928.23 0.54
Gad1-F-400041 11378 GadMARCM-F000330_seg001 Gad1-Gal4 F 4885.77 0.57
Gad1-F-400047 11379 GadMARCM-F000334_seg001 Gad1-Gal4 F 5137.21 0.62
Cha-F-300000 11570 ChaMARCM-F000009_seg001 Cha-Gal4 F 4868.68 0.58
Trh-F-600099 12452 TPHMARCM-1244F_seg3 Trh-Gal4 F 5300.80 0.61
Gad1-F-100002 13167 GadMARCM-F004_seg1 Gad1-Gal4 F 5015.65 0.57
Trh-F-700013 14225 TPHMARCM-678F_seg2 Trh-Gal4 F 5335.80 0.61
VGlut-F-300146 14438 DvGlutMARCM-F729_seg1 VGlut-Gal4 F 3595.27 0.54
VGlut-F-500227 15339 DvGlutMARCM-F1684_seg1 VGlut-Gal4 F 5231.92 0.61
VGlut-F-500021 15733 DvGlutMARCM-F144_seg2 VGlut-Gal4 F 5510.32 0.63