Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-400141), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
101 fru-M-500143 XVI 0.61
1048 VGlut-F-000167 XV 0.55
599 VGlut-F-500640 XVI 0.53
41 fru-M-700086 XVI 0.52
111 fru-M-100078 XVI 0.47

Cluster composition

This cluster has 33 neurons. The exemplar of this cluster (VGlut-F-400141) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-400141 15534 DvGlutMARCM-F679_seg1 VGlut-Gal4 F 16628.28 1.00
Cha-F-000323 4316 ChaMARCM-F001378_seg002 Cha-Gal4 F 9440.51 0.57
Cha-F-300289 5084 ChaMARCM-F001148_seg002 Cha-Gal4 F 10130.16 0.59
Cha-F-300176 5249 ChaMARCM-F000651_seg001 Cha-Gal4 F 9428.75 0.58
Cha-F-300247 5582 ChaMARCM-F000875_seg001 Cha-Gal4 F 9258.79 0.59
fru-F-700015 6020 FruMARCM-F000186_seg001 fru-Gal4 F 10100.26 0.60
VGlut-F-500801 6523 DvGlutMARCM-F004294_seg002 VGlut-Gal4 F 10199.24 0.62
VGlut-F-600724 6838 DvGlutMARCM-F004020_seg002 VGlut-Gal4 F 10217.83 0.61
Cha-F-200109 7259 ChaMARCM-F000551_seg001 Cha-Gal4 F 8470.03 0.55
Cha-F-100049 7669 ChaMARCM-F000496_seg003 Cha-Gal4 F 9605.44 0.59
fru-F-500148 7848 FruMARCM-F000757_seg001 fru-Gal4 F 9078.42 0.57
fru-F-600049 7901 FruMARCM-F000845_seg002 fru-Gal4 F 9466.76 0.58
VGlut-F-600684 8010 DvGlutMARCM-F003828_seg002 VGlut-Gal4 F 8892.78 0.58
VGlut-F-600686 8024 DvGlutMARCM-F003838_seg002 VGlut-Gal4 F 7898.42 0.53
VGlut-F-900094 8623 DvGlutMARCM-F003676_seg001 VGlut-Gal4 F 9729.12 0.57
VGlut-F-700326 9271 DvGlutMARCM-F003328_seg001 VGlut-Gal4 F 8664.99 0.52
Gad1-F-100050 9609 GadMARCM-F000473_seg001 Gad1-Gal4 F 9731.93 0.58
fru-F-600017 9929 FruMARCM-F000507_seg002 fru-Gal4 F 9677.72 0.60
Cha-F-100004 10078 ChaMARCM-F000039_seg001 Cha-Gal4 F 8064.46 0.56
VGlut-F-500327 10249 DvGlutMARCM-F2059_seg2 VGlut-Gal4 F 9299.18 0.58
Gad1-F-300034 10562 GadMARCM-F000086_seg002 Gad1-Gal4 F 10147.05 0.64
Gad1-F-700007 10629 GadMARCM-F000131_seg001 Gad1-Gal4 F 8729.69 0.53
Gad1-F-700009 10631 GadMARCM-F000132_seg001 Gad1-Gal4 F 9604.21 0.58
Gad1-F-200056 11231 GadMARCM-F000213_seg001 Gad1-Gal4 F 9789.60 0.59
Gad1-F-300092 11390 GadMARCM-F000342_seg001 Gad1-Gal4 F 10178.45 0.62
Cha-F-700005 11600 ChaMARCM-F000029_seg002 Cha-Gal4 F 9315.93 0.54
VGlut-F-400572 12257 DvGlutMARCM-F002717_seg001 VGlut-Gal4 F 9952.21 0.60
VGlut-F-400229 14543 DvGlutMARCM-F812_seg1 VGlut-Gal4 F 10891.73 0.64
VGlut-F-100071 14727 DvGlutMARCM-F987_seg1 VGlut-Gal4 F 9273.72 0.53
VGlut-F-300224 14895 DvGlutMARCM-F1239_seg1 VGlut-Gal4 F 9389.82 0.62
VGlut-F-600013 15878 DvGlutMARCM-F280_seg1 VGlut-Gal4 F 9044.55 0.57
VGlut-F-500055 15899 DvGlutMARCM-F299-X2_seg1 VGlut-Gal4 F 7835.55 0.48
VGlut-F-400053 15902 DvGlutMARCM-F300-X2_seg2 VGlut-Gal4 F 10033.11 0.65