Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-500310), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
931 VGlut-F-100079 XVI 0.61
599 VGlut-F-500640 XVI 0.57
88 fru-M-500118 XVI 0.52
833 VGlut-F-500352 XVI 0.51
979 VGlut-F-400141 XVI 0.48

Cluster composition

This cluster has 30 neurons. The exemplar of this cluster (VGlut-F-500310) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-500310 12891 DvGlutMARCM-F1934_seg1 VGlut-Gal4 F 7368.83 1.00
fru-M-500147 443 FruMARCM-M001555_seg002 fru-Gal4 M 4091.49 0.54
fru-M-600061 1261 FruMARCM-M001452_seg003 fru-Gal4 M 4643.50 0.63
fru-M-500092 1445 FruMARCM-M001014_seg002 fru-Gal4 M 4398.77 0.59
Cha-F-200314 4257 ChaMARCM-F001339_seg002 Cha-Gal4 F 3681.19 0.52
fru-F-400195 4744 FruMARCM-F002066_seg002 fru-Gal4 F 4072.39 0.57
Cha-F-400168 5379 ChaMARCM-F000744_seg001 Cha-Gal4 F 4059.64 0.58
VGlut-F-400813 6734 DvGlutMARCM-F003941_seg001 VGlut-Gal4 F 4713.00 0.63
fru-F-400113 7331 FruMARCM-F000968_seg001 fru-Gal4 F 4186.00 0.57
fru-F-700098 7343 FruMARCM-F000978_seg002 fru-Gal4 F 4586.23 0.62
fru-F-500108 7762 FruMARCM-F000662_seg001 fru-Gal4 F 4508.19 0.61
VGlut-F-400777 7912 DvGlutMARCM-F003756_seg001 VGlut-Gal4 F 4588.32 0.61
Cha-F-600011 8047 ChaMARCM-F000123_seg001 Cha-Gal4 F 4289.64 0.60
Cha-F-400063 8383 ChaMARCM-F000323_seg001 Cha-Gal4 F 4422.57 0.62
VGlut-F-700294 8536 DvGlutMARCM-F003112_seg002 VGlut-Gal4 F 4459.99 0.60
VGlut-F-400764 8682 DvGlutMARCM-F003723_seg002 VGlut-Gal4 F 4771.05 0.63
VGlut-F-500678 8941 DvGlutMARCM-F003508_seg002 VGlut-Gal4 F 4403.61 0.57
Gad1-F-300114 9581 GadMARCM-F000451_seg001 Gad1-Gal4 F 4567.17 0.59
Gad1-F-200113 9587 GadMARCM-F000456_seg001 Gad1-Gal4 F 4653.48 0.63
fru-F-500006 9759 FruMARCM-F000271_seg001 fru-Gal4 F 5013.93 0.65
fru-F-500072 9998 FruMARCM-F000583_seg002 fru-Gal4 F 4957.26 0.67
fru-F-500084 10016 FruMARCM-F000604_seg002 fru-Gal4 F 4157.74 0.58
Gad1-F-900015 10626 GadMARCM-F000128_seg001 Gad1-Gal4 F 4659.02 0.62
VGlut-F-400609 10919 DvGlutMARCM-F002816_seg001 VGlut-Gal4 F 4198.97 0.55
VGlut-F-600231 11833 DvGlutMARCM-F002392_seg001 VGlut-Gal4 F 4243.08 0.58
VGlut-F-600378 12224 DvGlutMARCM-F002689_seg002 VGlut-Gal4 F 4242.34 0.57
VGlut-F-600103 12914 DvGlutMARCM-F1953_seg2 VGlut-Gal4 F 4339.78 0.58
VGlut-F-400506 13149 DvGlutMARCM-F2182_seg1 VGlut-Gal4 F 4042.53 0.56
VGlut-F-300297 15244 DvGlutMARCM-F1565_seg1 VGlut-Gal4 F 4455.09 0.58
VGlut-F-400102 16189 DvGlutMARCM-F571-X3_seg3 VGlut-Gal4 F 4004.70 0.53