Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-500134), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
806 Trh-F-100085 XII 0.72
172 Trh-M-100092 XII 0.64
144 Trh-M-400113 XII 0.58
662 Tdc2-F-400026 XIII 0.56
653 Trh-F-000043 XIX 0.55
545 VGlut-F-700278 XII 0.54
151 Trh-M-200126 XII 0.52
201 Trh-M-100007 XII 0.51
400 VGlut-F-500072 XII 0.51

Cluster composition

This cluster has 9 neurons. The exemplar of this cluster (VGlut-F-500134) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-500134 14647 DvGlutMARCM-F901_seg1 VGlut-Gal4 F 79291.82 1.00
fru-M-300292 250 FruMARCM-M002480_seg001 fru-Gal4 M 59919.88 0.73
fru-M-300234 773 FruMARCM-M001984_seg001 fru-Gal4 M 59587.21 0.72
fru-M-700042 1973 FruMARCM-M000618_seg001 fru-Gal4 M 59105.04 0.73
fru-M-100011 2381 FruMARCM-M000109_seg002 fru-Gal4 M 59958.17 0.76
fru-F-300101 4583 FruMARCM-F001698_seg001 fru-Gal4 F 61842.42 0.77
VGlut-F-500511 11639 DvGlutMARCM-F002213_seg001 VGlut-Gal4 F 58982.55 0.74
VGlut-F-000331 15002 DvGlutMARCM-F1342_seg1 VGlut-Gal4 F 54390.94 0.70
VGlut-F-300262 15141 DvGlutMARCM-F1474_seg1 VGlut-Gal4 F 53797.43 0.70