Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Tdc2-F-400026), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
994 VGlut-F-200045 XIX 0.15
653 Trh-F-000043 XIX 0.11
258 Cha-F-100277 XIII 0.07
1044 VGlut-F-300085 XIII -0.12
513 Cha-F-300036 XII -0.12

Cluster composition

This cluster has 7 neurons. The exemplar of this cluster (Tdc2-F-400026) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Tdc2-F-400026 10386 dTdc2MARCM-F000115_seg001 Tdc2-Gal4 F 400149.20 1.00
Cha-F-900038 5237 ChaMARCM-F001007_seg001 Cha-Gal4 F 141687.27 0.50
Gad1-F-200095 11341 GadMARCM-F000307_seg001 Gad1-Gal4 F -44759.53 0.20
Tdc2-F-000013 12661 dTdc2MARCM-F000083_seg001 Tdc2-Gal4 F 166967.32 0.55
Tdc2-F-000007 13201 dTdc-2MARCM-F-032-montage_seg1 Tdc2-Gal4 F 263112.64 0.67
Trh-F-600017 14123 TPHMARCM-509F-montage_seg1 Trh-Gal4 F 92100.41 0.33
VGlut-F-000344 15025 DvGlutMARCM-F1364_seg1 VGlut-Gal4 F 9315.64 0.18