Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-300085), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
662 Tdc2-F-400026 XIII 0.73
258 Cha-F-100277 XIII 0.43
994 VGlut-F-200045 XIX 0.14
909 VGlut-F-000297 XIII 0.13
653 Trh-F-000043 XIX 0.12

Cluster composition

This cluster has 9 neurons. The exemplar of this cluster (VGlut-F-300085) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-300085 16169 DvGlutMARCM-F550_seg1 VGlut-Gal4 F 213866.96 1.00
VGlut-F-500123 6134 DvGlutMARCM-F870_seg2 VGlut-Gal4 F 71908.13 0.35
VGlut-F-300575 6892 DvGlutMARCM-F004048_seg001 VGlut-Gal4 F 154155.75 0.74
VGlut-F-300555 7433 DvGlutMARCM-F003886_seg001 VGlut-Gal4 F 150423.45 0.70
VGlut-F-500322 10247 DvGlutMARCM-F2042_seg1 VGlut-Gal4 F 154166.81 0.74
Gad1-F-300073 11318 GadMARCM-F000292_seg001 Gad1-Gal4 F 14845.07 0.33
VGlut-F-200386 13163 DvGlutMARCM-F2200_seg1 VGlut-Gal4 F 147144.37 0.74
VGlut-F-300235 14965 DvGlutMARCM-F1303_seg1 VGlut-Gal4 F 161275.66 0.75
VGlut-F-300327 15378 DvGlutMARCM-F1734_seg1 VGlut-Gal4 F 71078.71 0.53