Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Trh-M-400113), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
806 Trh-F-100085 XII 0.79
662 Tdc2-F-400026 XIII 0.71
201 Trh-M-100007 XII 0.66
653 Trh-F-000043 XIX 0.61
400 VGlut-F-500072 XII 0.57
172 Trh-M-100092 XII 0.56
774 VGlut-F-500418 XII 0.51

Cluster composition

This cluster has 56 neurons. The exemplar of this cluster (Trh-M-400113) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Trh-M-400113 2075 TPHMARCM-M001577_seg002 Trh-Gal4 M 86341.75 1.00
Trh-M-300114 1995 TPHMARCM-1143M_seg001 Trh-Gal4 M 62497.12 0.74
Trh-M-200076 2077 TPHMARCM-M001579_seg001 Trh-Gal4 M 62003.63 0.74
Trh-M-300147 2157 TPHMARCM-M001646_seg001 Trh-Gal4 M 64349.86 0.74
Trh-M-400137 2162 TPHMARCM-M001651_seg001 Trh-Gal4 M 58565.02 0.72
Trh-M-300155 2171 TPHMARCM-M001661_seg001 Trh-Gal4 M 64305.24 0.75
Trh-M-200127 2279 TPHMARCM-M001762_seg001 Trh-Gal4 M 57331.29 0.71
5-HT1B-M-500002 2489 5HT1bMARCM-M000035_seg001 5-HT1B-Gal4 M 64743.82 0.76
5-HT1B-M-400003 2499 5HT1bMARCM-M000044_seg002 5-HT1B-Gal4 M 61677.63 0.74
5-HT1B-M-400009 2509 5HT1bMARCM-M000052_seg001 5-HT1B-Gal4 M 32268.87 0.57
5-HT1B-M-300000 2510 5HT1bMARCM-M000053_seg001 5-HT1B-Gal4 M 61526.61 0.73
5-HT1B-M-400010 2514 5HT1bMARCM-M000056_seg001 5-HT1B-Gal4 M 61722.46 0.74
5-HT1B-M-400015 2523 5HT1bMARCM-M000064_seg001 5-HT1B-Gal4 M 47979.17 0.66
5-HT1B-M-400017 2527 5HT1bMARCM-M000068_seg001 5-HT1B-Gal4 M 63932.94 0.75
Trh-M-300141 2568 TPHMARCM-M001544_seg002 Trh-Gal4 M 64228.95 0.75
Trh-M-200059 2591 TPHMARCM-1174M_seg1 Trh-Gal4 M 64339.14 0.75
Trh-M-300124 2599 TPHMARCM-1218M_seg1 Trh-Gal4 M 60650.21 0.72
Trh-M-600068 2611 TPHMARCM-1317M_seg1 Trh-Gal4 M 58642.57 0.72
Trh-M-500102 2681 TPHMARCM-M001447_seg001 Trh-Gal4 M 65950.21 0.76
Trh-M-100066 2899 TPHMARCM-1138M_seg1 Trh-Gal4 M 64991.67 0.76
Trh-M-300074 2919 TPHMARCM-852M_seg1 Trh-Gal4 M 61539.17 0.74
TH-M-200054 3235 THMARCM-379M_seg1 TH-Gal4 M 33978.23 0.42
TH-M-200089 3298 THMARCM-510M_seg1 TH-Gal4 M 39420.35 0.58
Trh-M-300014 3511 TPHMARCM-392M_seg1 Trh-Gal4 M 64791.15 0.76
Trh-M-300015 3512 TPHMARCM-393M_seg1 Trh-Gal4 M 46218.64 0.66
Trh-M-300016 3513 TPHMARCM-394M_seg1 Trh-Gal4 M 63116.70 0.74
Trh-M-300021 3518 TPHMARCM-398M_seg1 Trh-Gal4 M 60612.48 0.73
Trh-M-300044 3557 TPHMARCM-487M_seg2 Trh-Gal4 M 56277.46 0.71
Trh-M-200028 3596 TPHMARCM-539M_seg1 Trh-Gal4 M 64974.31 0.75
Gad1-F-300137 3992 GadMARCM-F000612_seg001 Gad1-Gal4 F 48239.95 0.66
Cha-F-600118 5439 ChaMARCM-F000781_seg001 Cha-Gal4 F 45746.82 0.64
VGlut-F-000560 8628 DvGlutMARCM-F003681_seg001 VGlut-Gal4 F 42829.71 0.62
Gad1-F-600063 9649 GadMARCM-F000502_seg001 Gad1-Gal4 F 48766.56 0.66
Gad1-F-300048 10697 GadMARCM-F000196_seg001 Gad1-Gal4 F 37370.33 0.59
5-HT1B-F-500019 11199 5HT1bMARCM-F000029_seg001 5-HT1B-Gal4 F 59321.38 0.73
Gad1-F-900029 11301 GadMARCM-F000274_seg002 Gad1-Gal4 F 43388.73 0.62
5-HT1B-F-500003 11608 5HT1bMARCM-F000005_seg001 5-HT1B-Gal4 F 53488.22 0.69
5-HT1B-F-500005 11610 5HT1bMARCM-F000007_seg001 5-HT1B-Gal4 F 56507.72 0.71
5-HT1B-F-500006 11611 5HT1bMARCM-F000007_seg002 5-HT1B-Gal4 F 47868.15 0.65
5-HT1B-F-500008 11613 5HT1bMARCM-F000009_seg001 5-HT1B-Gal4 F 59488.05 0.72
5-HT1B-F-500009 11614 5HT1bMARCM-F000010_seg001 5-HT1B-Gal4 F 57397.79 0.72
VGlut-F-600294 12025 DvGlutMARCM-F002544_seg001 VGlut-Gal4 F 57365.52 0.71
Trh-F-600106 12496 TPHMARCM-1281F_seg2 Trh-Gal4 F 62090.77 0.74
Trh-F-300145 12522 TPHMARCM-1304F_seg1 Trh-Gal4 F 64280.18 0.74
Trh-F-500186 12544 TPHMARCM-1332F_seg1 Trh-Gal4 F 62450.95 0.75
Trh-F-700065 12558 TPHMARCM-1346F_seg1 Trh-Gal4 F 57776.27 0.72
Trh-F-600107 12561 TPHMARCM-1349F_seg1 Trh-Gal4 F 63888.92 0.75
Trh-F-200104 12696 TPHMARCM-1120F_seg1 Trh-Gal4 F 52268.07 0.67
TH-F-700020 13366 THMARCM-110_seg1 TH-Gal4 F 47120.69 0.64
TH-F-700029 13375 THMARCM-134F_seg1 TH-Gal4 F 30848.35 0.55
TH-F-700033 13379 THMARCM-139F_seg1 TH-Gal4 F 34549.91 0.54
TH-F-200080 13539 THMARCM-427F_seg1 TH-Gal4 F 32556.34 0.54
Trh-F-300050 14077 TPHMARCM-426F_seg1 Trh-Gal4 F 55870.73 0.70
Trh-F-500040 14109 TPHMARCM-468F_seg1 Trh-Gal4 F 63029.23 0.74
Trh-F-200068 14112 TPHMARCM-470F_seg1 Trh-Gal4 F 63349.76 0.75
VGlut-F-500135 14648 DvGlutMARCM-F902_seg1 VGlut-Gal4 F 53878.07 0.68