Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Cha-F-100346), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
775 VGlut-F-500422 II 0.73
509 VGlut-F-200536 VII 0.65
262 Cha-F-200316 II 0.59
967 VGlut-F-000404 II 0.57
486 VGlut-F-300556 II 0.54

Cluster composition

This cluster has 8 neurons. The exemplar of this cluster (Cha-F-100346) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Cha-F-100346 4416 ChaMARCM-F001465_seg001 Cha-Gal4 F 21388.97 1.00
fru-M-300162 962 FruMARCM-M001470_seg002 fru-Gal4 M 8848.08 0.55
Cha-F-100350 4424 ChaMARCM-F001471_seg001 Cha-Gal4 F 14768.36 0.63
Cha-F-900011 8335 ChaMARCM-F000288_seg002 Cha-Gal4 F 10223.26 0.53
Cha-F-600026 8359 ChaMARCM-F000304_seg002 Cha-Gal4 F 14796.52 0.52
VGlut-F-400646 11672 DvGlutMARCM-F002248_seg004 VGlut-Gal4 F 9570.28 0.42
VGlut-F-600250 11854 DvGlutMARCM-F002403_seg004 VGlut-Gal4 F 9878.56 0.50
VGlut-F-400070 15962 DvGlutMARCM-F354_seg1 VGlut-Gal4 F 9329.89 0.50