Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Cha-F-200316), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
486 VGlut-F-300556 II 0.64
766 VGlut-F-500387 II 0.58
660 Tdc2-F-200049 I 0.50
647 Trh-F-000067 II 0.49
509 VGlut-F-200536 VII 0.44

Cluster composition

This cluster has 8 neurons. The exemplar of this cluster (Cha-F-200316) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Cha-F-200316 4259 ChaMARCM-F001341_seg001 Cha-Gal4 F 22060.94 1.00
Cha-F-100265 4210 ChaMARCM-F001300_seg001 Cha-Gal4 F 11486.97 0.43
Cha-F-100330 4381 ChaMARCM-F001435_seg001 Cha-Gal4 F 11301.29 0.46
Cha-F-300219 5461 ChaMARCM-F000797_seg001 Cha-Gal4 F 11341.65 0.56
Cha-F-300147 7095 ChaMARCM-F000572_seg001 Cha-Gal4 F 14818.76 0.69
Cha-F-100046 7617 ChaMARCM-F000459_seg001 Cha-Gal4 F 11638.36 0.62
VGlut-F-600359 12200 DvGlutMARCM-F002672_seg001 VGlut-Gal4 F 7285.21 0.47
VGlut-F-800038 15412 DvGlutMARCM-F1770_seg1 VGlut-Gal4 F 11579.76 0.43