Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-500387), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
486 VGlut-F-300556 II 0.63
967 VGlut-F-000404 II 0.55
509 VGlut-F-200536 VII 0.44
329 Cha-F-300270 I 0.42
775 VGlut-F-500422 II 0.41

Cluster composition

This cluster has 14 neurons. The exemplar of this cluster (VGlut-F-500387) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-500387 11943 DvGlutMARCM-F002477_seg001 VGlut-Gal4 F 19737.54 1.00
fru-M-200144 1351 FruMARCM-M001099_seg001 fru-Gal4 M 13598.28 0.68
Cha-F-200373 4404 ChaMARCM-F001452_seg001 Cha-Gal4 F 7504.40 0.50
Cha-F-100131 4876 ChaMARCM-F000995_seg002 Cha-Gal4 F 11300.60 0.66
Cha-F-300201 5372 ChaMARCM-F000739_seg001 Cha-Gal4 F 14765.11 0.70
Cha-F-700147 5458 ChaMARCM-F000795_seg001 Cha-Gal4 F 13402.58 0.66
VGlut-F-900042 6046 DvGlutMARCM-F002754_seg001 VGlut-Gal4 F 7619.42 0.50
Cha-F-700142 7131 ChaMARCM-F000599_seg001 Cha-Gal4 F 9036.08 0.59
Cha-F-500072 8292 ChaMARCM-F000265_seg001 Cha-Gal4 F 5444.04 0.37
Gad1-F-700036 9681 GadMARCM-F000531_seg001 Gad1-Gal4 F 6800.64 0.45
fru-F-400047 9763 FruMARCM-F000274_seg001 fru-Gal4 F 11367.29 0.45
VGlut-F-300426 10954 DvGlutMARCM-F002848_seg001 VGlut-Gal4 F 14197.20 0.69
VGlut-F-600448 10982 DvGlutMARCM-F002872_seg001 VGlut-Gal4 F 7415.28 0.47
VGlut-F-400657 11683 DvGlutMARCM-F002259_seg001 VGlut-Gal4 F 12870.30 0.65