Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-000404), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
509 VGlut-F-200536 VII 0.54
486 VGlut-F-300556 II 0.52
58 fru-M-300223 I 0.52
766 VGlut-F-500387 II 0.50
775 VGlut-F-500422 II 0.46

Cluster composition

This cluster has 13 neurons. The exemplar of this cluster (VGlut-F-000404) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-000404 15422 DvGlutMARCM-F1779_seg1 VGlut-Gal4 F 46388.33 1.00
fru-M-000195 304 FruMARCM-M002531_seg001 fru-Gal4 M 34854.42 0.74
fru-M-100156 480 FruMARCM-M001582_seg002 fru-Gal4 M 33085.67 0.71
fru-M-100101 1043 FruMARCM-M001224_seg001 fru-Gal4 M 33060.29 0.70
fru-M-200057 1928 FruMARCM-M000522_seg001 fru-Gal4 M 32102.96 0.72
fru-M-900004 2369 FruMARCM-M000102_seg001 fru-Gal4 M 33730.53 0.72
fru-F-800048 4557 FruMARCM-F001667_seg001 fru-Gal4 F 32256.21 0.70
VGlut-F-700249 8446 DvGlutMARCM-F003046_seg001 VGlut-Gal4 F 14616.52 0.52
Gad1-F-400094 9622 GadMARCM-F000483_seg001 Gad1-Gal4 F 21887.84 0.45
VGlut-F-000134 10253 DvGlutMARCM-F528_seg1 VGlut-Gal4 F 30974.24 0.55
VGlut-F-000451 11757 DvGlutMARCM-F002328_seg001 VGlut-Gal4 F 34439.72 0.74
Trh-F-200098 12678 TPHMARCM-1005F_seg1 Trh-Gal4 F 17852.42 0.52
VGlut-F-600084 15329 DvGlutMARCM-F1670_seg1 VGlut-Gal4 F 34642.76 0.74