Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-200536), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
686 VGlut-F-900065 VII 0.43
406 fru-F-000053 VII 0.39
660 Tdc2-F-200049 I 0.24
486 VGlut-F-300556 II 0.23
876 Trh-F-100023 X 0.13

Cluster composition

This cluster has 4 neurons. The exemplar of this cluster (VGlut-F-200536) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-200536 7982 DvGlutMARCM-F003807_seg001 VGlut-Gal4 F 69554.03 1.00
VGlut-F-300571 6814 DvGlutMARCM-F004001_seg001 VGlut-Gal4 F 27256.41 0.35
VGlut-F-600204 11769 DvGlutMARCM-F002339_seg001 VGlut-Gal4 F 44436.62 0.64
VGlut-F-400309 14399 DvGlutMARCM-F1079_seg1 VGlut-Gal4 F 23485.17 0.38