Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-500422), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
509 VGlut-F-200536 VII 0.62
486 VGlut-F-300556 II 0.45
977 VGlut-F-400133 II 0.44
647 Trh-F-000067 II 0.38
406 fru-F-000053 VII 0.33

Cluster composition

This cluster has 15 neurons. The exemplar of this cluster (VGlut-F-500422) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-500422 12013 DvGlutMARCM-F002534_seg002 VGlut-Gal4 F 294559.65 1.00
fru-M-300135 1067 FruMARCM-M001245_seg001 fru-Gal4 M 213130.54 0.60
fru-M-000007 1931 FruMARCM-M000524_seg002 fru-Gal4 M 132156.33 0.62
VGlut-F-400594 6051 DvGlutMARCM-F002765_seg001 VGlut-Gal4 F 157438.20 0.64
Cha-F-600080 7720 ChaMARCM-F000532_seg002 Cha-Gal4 F 23253.92 0.42
fru-F-900013 7877 FruMARCM-F000800_seg001 fru-Gal4 F 108771.99 0.59
VGlut-F-300549 8012 DvGlutMARCM-F003829_seg002 VGlut-Gal4 F 221035.44 0.78
Cha-F-400035 8190 ChaMARCM-F000203_seg001 Cha-Gal4 F 126928.36 0.61
Cha-F-400050 8260 ChaMARCM-F000245_seg001 Cha-Gal4 F 155205.69 0.50
VGlut-F-300137 14420 DvGlutMARCM-F714_seg1 VGlut-Gal4 F 124630.50 0.48
VGlut-F-300157 14497 DvGlutMARCM-F767_seg1 VGlut-Gal4 F 220868.52 0.77
VGlut-F-900021 14972 DvGlutMARCM-F1311_seg1 VGlut-Gal4 F 127160.62 0.60
VGlut-F-600074 15153 DvGlutMARCM-F1485_seg2 VGlut-Gal4 F 125758.00 0.61
VGlut-F-500185 15220 DvGlutMARCM-F1546_seg2 VGlut-Gal4 F 181959.86 0.64
VGlut-F-000038 15846 DvGlutMARCM-F253_seg1 VGlut-Gal4 F 222030.40 0.78