Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-400133), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
406 fru-F-000053 VII 0.66
775 VGlut-F-500422 II 0.63
293 fru-F-000074 II 0.60
686 VGlut-F-900065 VII 0.59
509 VGlut-F-200536 VII 0.55
874 Trh-F-100011 III 0.51

Cluster composition

This cluster has 12 neurons. The exemplar of this cluster (VGlut-F-400133) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-400133 15519 DvGlutMARCM-F666_seg1 VGlut-Gal4 F 57367.55 1.00
Cha-F-100252 4165 ChaMARCM-F001276_seg002 Cha-Gal4 F 27134.82 0.52
Cha-F-400171 5395 ChaMARCM-F000754_seg001 Cha-Gal4 F 22642.18 0.55
fru-F-700081 7293 FruMARCM-F000923_seg001 fru-Gal4 F 23772.09 0.32
Cha-F-000062 7450 ChaMARCM-F000333_seg002 Cha-Gal4 F 18587.26 0.49
Cha-F-500044 8067 ChaMARCM-F000137_seg001 Cha-Gal4 F 22905.30 0.41
Gad1-F-200022 10728 GadMARCM-F000055_seg001 Gad1-Gal4 F 23500.35 0.51
VGlut-F-700204 10939 DvGlutMARCM-F002833_seg001 VGlut-Gal4 F 38128.83 0.61
VGlut-F-300412 11955 DvGlutMARCM-F002488_seg001 VGlut-Gal4 F 36306.06 0.63
VGlut-F-400577 12270 DvGlutMARCM-F002727_seg001 VGlut-Gal4 F 42875.42 0.74
Trh-F-200019 13940 TPHMARCM-232F_seg1 Trh-Gal4 F 25226.18 0.45
VGlut-F-400041 15837 DvGlutMARCM-F243_seg1 VGlut-Gal4 F 41433.87 0.70