Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Gad1-F-200131), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
931 VGlut-F-100079 XVI 0.49
88 fru-M-500118 XVI 0.48
816 VGlut-F-500310 XVI 0.43
599 VGlut-F-500640 XVI 0.43
630 fru-F-500012 XVI 0.41

Cluster composition

This cluster has 15 neurons. The exemplar of this cluster (Gad1-F-200131) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Gad1-F-200131 3977 GadMARCM-F000599_seg002 Gad1-Gal4 F 7528.28 1.00
Gad1-F-100062 3940 GadMARCM-F000570_seg001 Gad1-Gal4 F 3390.45 0.49
Gad1-F-000071 4067 GadMARCM-F000661_seg002 Gad1-Gal4 F 4322.85 0.57
Cha-F-100257 4169 ChaMARCM-F001279_seg002 Cha-Gal4 F 4322.76 0.59
Cha-F-000108 5252 ChaMARCM-F000653_seg001 Cha-Gal4 F 3422.44 0.44
Cha-F-800041 5556 ChaMARCM-F000856_seg002 Cha-Gal4 F 3712.54 0.54
Cha-F-300244 5577 ChaMARCM-F000873_seg001 Cha-Gal4 F 3696.83 0.55
Cha-F-500122 7078 ChaMARCM-F000561_seg003 Cha-Gal4 F 3895.04 0.46
Cha-F-700136 7102 ChaMARCM-F000577_seg002 Cha-Gal4 F 3325.70 0.49
Gad1-F-300110 9575 GadMARCM-F000446_seg001 Gad1-Gal4 F 4719.78 0.63
Gad1-F-500008 10529 GadMARCM-F000062_seg001 Gad1-Gal4 F 3919.07 0.52
Gad1-F-300019 10716 GadMARCM-F000046_seg001 Gad1-Gal4 F 3541.89 0.56
Gad1-F-400002 10723 GadMARCM-F000051_seg001 Gad1-Gal4 F 3468.71 0.51
Gad1-F-500064 11352 GadMARCM-F000312_seg001 Gad1-Gal4 F 3828.16 0.52
Gad1-F-400038 11367 GadMARCM-F000323_seg001 Gad1-Gal4 F 3389.72 0.53