Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-200145), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
661 Tdc2-F-000027 VII 0.59
1006 VGlut-F-500043 III 0.56
76 fru-M-300240 III 0.55
173 Trh-M-000051 III 0.54
468 VGlut-F-600670 III 0.46

Cluster composition

This cluster has 6 neurons. The exemplar of this cluster (VGlut-F-200145) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-200145 15561 DvGlutMARCM-F695-X2_seg1 VGlut-Gal4 F 115076.78 1.00
Gad1-F-200132 3978 GadMARCM-F000600_seg001 Gad1-Gal4 F 39718.37 0.54
Cha-F-200296 4216 ChaMARCM-F001305_seg001 Cha-Gal4 F 42560.55 0.48
Cha-F-000315 4265 ChaMARCM-F001345_seg001 Cha-Gal4 F 22397.29 0.43
Cha-F-600074 7714 ChaMARCM-F000529_seg001 Cha-Gal4 F 15522.55 0.30
VGlut-F-200204 8425 DvGlutMARCM-F1131_seg1 VGlut-Gal4 F 81558.87 0.73