Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Gad1-F-400089), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
745 Cha-F-300003 XV 0.57
59 fru-M-400176 XV 0.46
1048 VGlut-F-000167 XV 0.45
169 Trh-M-200075 XV 0.40
522 Cha-F-300056 XVI 0.38

Cluster composition

This cluster has 19 neurons. The exemplar of this cluster (Gad1-F-400089) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Gad1-F-400089 9612 GadMARCM-F000476_seg001 Gad1-Gal4 F 5159.32 1.00
fru-M-000131 746 FruMARCM-M001959_seg002 fru-Gal4 M 2877.49 0.54
fru-M-400077 1428 FruMARCM-M000940_seg002 fru-Gal4 M 3313.78 0.65
fru-M-200109 1489 FruMARCM-M001044_seg001 fru-Gal4 M 2786.77 0.51
fru-M-100032 1871 FruMARCM-M000414_seg001 fru-Gal4 M 2556.97 0.52
5-HT1B-M-200001 2539 5HT1bMARCM-M000078_seg001 5-HT1B-Gal4 M 2966.45 0.56
Cha-F-200326 4293 ChaMARCM-F001364_seg002 Cha-Gal4 F 2745.01 0.50
Cha-F-300319 4453 ChaMARCM-F001495_seg001 Cha-Gal4 F 3441.21 0.66
Cha-F-400178 5443 ChaMARCM-F000783_seg001 Cha-Gal4 F 2142.20 0.43
Cha-F-300224 5485 ChaMARCM-F000809_seg002 Cha-Gal4 F 2531.96 0.50
fru-F-000045 6265 FruMARCM-F001301_seg001 fru-Gal4 F 2914.42 0.51
fru-F-400090 7854 FruMARCM-F000763_seg001 fru-Gal4 F 2702.28 0.50
VGlut-F-300463 9318 DvGlutMARCM-F003155_seg002 VGlut-Gal4 F 2528.41 0.47
Gad1-F-600022 10596 GadMARCM-F000110_seg001 Gad1-Gal4 F 2744.93 0.51
Gad1-F-900000 10611 GadMARCM-F000119_seg001 Gad1-Gal4 F 2779.46 0.51
Gad1-F-500067 11355 GadMARCM-F000314_seg002 Gad1-Gal4 F 2713.06 0.54
fru-F-100000 11435 FruMARCM-F000055_seg001 fru-Gal4 F 3026.35 0.58
fru-F-700019 11528 FruMARCM-F000189_seg001 fru-Gal4 F 2275.20 0.46
5-HT1B-F-000004 11622 5HT1bMARCM-F000017_seg001 5-HT1B-Gal4 F 2422.10 0.48