Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Cha-F-300003), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
1048 VGlut-F-000167 XV 0.50
161 fru-M-100017 XV 0.46
169 Trh-M-200075 XV 0.44
615 Gad1-F-400089 XV 0.43
671 Gad1-F-300023 XV 0.42

Cluster composition

This cluster has 20 neurons. The exemplar of this cluster (Cha-F-300003) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Cha-F-300003 11573 ChaMARCM-F000010_seg002 Cha-Gal4 F 12083.97 1.00
fru-M-900046 809 FruMARCM-M002017_seg001 fru-Gal4 M 3079.20 0.41
fru-M-600039 989 FruMARCM-M001171_seg001 fru-Gal4 M 4553.79 0.44
fru-M-100001 2351 FruMARCM-M000044_seg001 fru-Gal4 M 5475.82 0.47
fru-M-300023 2405 FruMARCM-M000127_seg002 fru-Gal4 M 6678.45 0.60
fru-F-000140 3807 FruMARCM-F002562_seg001 fru-Gal4 F 6192.58 0.55
VGlut-F-100392 5724 DvGlutMARCM-F004431_seg001 VGlut-Gal4 F 6044.20 0.57
Cha-F-300143 7728 ChaMARCM-F000539_seg002 Cha-Gal4 F 3995.76 0.39
Gad1-F-700030 9502 GadMARCM-F000394_seg002 Gad1-Gal4 F 6570.94 0.60
Gad1-F-700031 9567 GadMARCM-F000441_seg001 Gad1-Gal4 F 6073.82 0.56
Gad1-F-200118 9621 GadMARCM-F000482_seg001 Gad1-Gal4 F 5564.17 0.54
Gad1-F-200038 10497 GadMARCM-F000151_seg002 Gad1-Gal4 F 4780.64 0.52
Gad1-F-200021 10727 GadMARCM-F000054_seg002 Gad1-Gal4 F 3221.23 0.32
Gad1-F-200061 11239 GadMARCM-F000220_seg002 Gad1-Gal4 F 6423.26 0.61
Gad1-F-000022 11265 GadMARCM-F000243_seg001 Gad1-Gal4 F 5422.43 0.51
Gad1-F-800015 11305 GadMARCM-F000278_seg001 Gad1-Gal4 F 6833.10 0.58
Gad1-F-400052 11398 GadMARCM-F000349_seg001 Gad1-Gal4 F 6338.99 0.56
fru-F-400012 11469 FruMARCM-F000082_seg001 fru-Gal4 F 6477.08 0.55
VGlut-F-100224 13104 DvGlutMARCM-F2129_seg1 VGlut-Gal4 F 5246.07 0.48
VGlut-F-400306 14387 DvGlutMARCM-F1067_seg1 VGlut-Gal4 F 3817.26 0.41