Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Trh-M-200075), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
1028 VGlut-F-000067 XIV 0.39
625 fru-F-400048 XV 0.35
101 fru-M-500143 XVI 0.35
630 fru-F-500012 XVI 0.35
889 Trh-F-300053 XIX 0.34

Cluster composition

This cluster has 19 neurons. The exemplar of this cluster (Trh-M-200075) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Trh-M-200075 2669 TPHMARCM-M001434_seg001 Trh-Gal4 M 217124.28 1.00
Trh-M-200110 935 TPHMARCM-M001724_seg002 Trh-Gal4 M 173583.83 0.80
Trh-M-100000 1975 TPHMARCM-0060M_seg1 Trh-Gal4 M 158042.99 0.76
Trh-M-300067 1989 TPHMARCM-0797M_seg001 Trh-Gal4 M 171436.91 0.68
Trh-M-200082 2094 TPHMARCM-M001593_seg002 Trh-Gal4 M 161104.60 0.76
Trh-M-200086 2118 TPHMARCM-M001615_seg002 Trh-Gal4 M 167734.03 0.78
Trh-M-200129 2281 TPHMARCM-M001763_seg002 Trh-Gal4 M 175713.78 0.81
Trh-M-100006 3381 TPHMARCM-068M_seg1 Trh-Gal4 M 168912.28 0.79
Cha-F-100260 4180 ChaMARCM-F001286_seg002 Cha-Gal4 F 26101.03 0.26
Cha-F-700169 4947 ChaMARCM-F001050_seg001 Cha-Gal4 F 157548.11 0.76
Cha-F-300200 5325 ChaMARCM-F000702_seg001 Cha-Gal4 F 78125.69 0.40
VGlut-F-000334 6084 DvGlutMARCM-F1344_seg2 VGlut-Gal4 F 117616.50 0.62
VGlut-F-000488 10209 DvGlutMARCM-F002239_seg001 VGlut-Gal4 F 112532.04 0.44
Trh-F-200069 11633 TPHMARCM-488F_seg1 Trh-Gal4 F 159338.37 0.77
Trh-F-200003 13843 TPHMARCM-111F_seg1 Trh-Gal4 F 169648.80 0.75
Trh-F-200078 14152 TPHMARCM-576F_seg1 Trh-Gal4 F 169285.63 0.80
Trh-F-200087 14244 TPHMARCM-697F_seg1 Trh-Gal4 F 165287.92 0.78
VGlut-F-400282 14695 DvGlutMARCM-F953_seg1 VGlut-Gal4 F 58470.27 0.40
VGlut-F-000075 16008 DvGlutMARCM-F397_seg1 VGlut-Gal4 F 41827.43 0.36