Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Cha-F-300056), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
26 fru-M-200296 XVI 0.60
533 Cha-F-900008 XVI 0.59
125 fru-M-000004 XVI 0.58
407 fru-F-600073 XVI 0.56
53 fru-M-000099 XVI 0.56
419 fru-F-200021 XVI 0.55

Cluster composition

This cluster has 30 neurons. The exemplar of this cluster (Cha-F-300056) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Cha-F-300056 8187 ChaMARCM-F000200_seg001 Cha-Gal4 F 7380.22 1.00
fru-M-200276 99 FruMARCM-M002297_seg002 fru-Gal4 M 4421.13 0.58
fru-M-200207 437 FruMARCM-M001552_seg002 fru-Gal4 M 4887.19 0.63
fru-M-500170 594 FruMARCM-M001786_seg003 fru-Gal4 M 5061.73 0.67
Cha-F-000111 5282 ChaMARCM-F000674_seg001 Cha-Gal4 F 4250.83 0.57
Cha-F-300206 5407 ChaMARCM-F000761_seg001 Cha-Gal4 F 4502.39 0.62
Cha-F-000075 7239 ChaMARCM-F000413_seg001 Cha-Gal4 F 4359.24 0.57
fru-F-700064 7271 FruMARCM-F000908_seg002 fru-Gal4 F 4204.82 0.59
Cha-F-300140 7682 ChaMARCM-F000504_seg003 Cha-Gal4 F 4298.99 0.61
Cha-F-500039 8034 ChaMARCM-F000117_seg001 Cha-Gal4 F 4219.23 0.58
VGlut-F-500536 8454 DvGlutMARCM-F003052_seg002 VGlut-Gal4 F 3794.37 0.50
VGlut-F-600512 8544 DvGlutMARCM-F003117_seg001 VGlut-Gal4 F 4708.59 0.60
VGlut-F-500676 8939 DvGlutMARCM-F003507_seg001 VGlut-Gal4 F 4735.23 0.66
VGlut-F-500689 8952 DvGlutMARCM-F003515_seg002 VGlut-Gal4 F 4364.64 0.59
fru-F-000022 9822 FruMARCM-F000389_seg001 fru-Gal4 F 4493.44 0.55
fru-F-500025 9906 FruMARCM-F000493_seg001 fru-Gal4 F 4184.73 0.58
fru-F-100028 10025 FruMARCM-F000609_seg001 fru-Gal4 F 4633.33 0.61
Cha-F-300021 10105 ChaMARCM-F000059_seg001 Cha-Gal4 F 3675.65 0.58
Gad1-F-500010 10531 GadMARCM-F000064_seg001 Gad1-Gal4 F 4776.51 0.65
Gad1-F-700011 10634 GadMARCM-F000135_seg001 Gad1-Gal4 F 4247.16 0.57
Gad1-F-200017 10708 GadMARCM-F000041_seg001 Gad1-Gal4 F 4828.02 0.64
VGlut-F-700217 10787 DvGlutMARCM-F002842_seg001 VGlut-Gal4 F 4049.72 0.48
Gad1-F-500044 11276 GadMARCM-F000251_seg001 Gad1-Gal4 F 4596.71 0.61
Gad1-F-300075 11369 GadMARCM-F000325_seg001 Gad1-Gal4 F 4292.77 0.59
Gad1-F-000029 11409 GadMARCM-F000354_seg002 Gad1-Gal4 F 4309.38 0.61
VGlut-F-500383 11927 DvGlutMARCM-F002461_seg001 VGlut-Gal4 F 4476.81 0.60
VGlut-F-400479 12995 DvGlutMARCM-F2027_seg1 VGlut-Gal4 F 4734.67 0.60
VGlut-F-100233 13132 DvGlutMARCM-F2160_seg1 VGlut-Gal4 F 4920.90 0.64
VGlut-F-600143 13141 DvGlutMARCM-F2172_seg1 VGlut-Gal4 F 4592.36 0.63
VGlut-F-200268 14987 DvGlutMARCM-F1324_seg1 VGlut-Gal4 F 4553.41 0.53