Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Cha-F-000296), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
775 VGlut-F-500422 II 0.78
13 fru-M-500232 I 0.71
451 VGlut-F-300582 I 0.58
509 VGlut-F-200536 VII 0.55
327 Cha-F-100171 I 0.55
406 fru-F-000053 VII 0.52
293 fru-F-000074 II 0.51
490 Cha-F-000064 I 0.51

Cluster composition

This cluster has 23 neurons. The exemplar of this cluster (Cha-F-000296) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Cha-F-000296 4186 ChaMARCM-F001290_seg002 Cha-Gal4 F 53506.60 1.00
fru-M-400208 127 FruMARCM-M002323_seg001 fru-Gal4 M 25627.71 0.46
Cha-F-100355 3883 ChaMARCM-F001547_seg001 Cha-Gal4 F 33224.69 0.64
Gad1-F-000097 4109 GadMARCM-F000694_seg001 Gad1-Gal4 F 35042.61 0.60
Cha-F-000237 5088 ChaMARCM-F001150_seg001 Cha-Gal4 F 31438.70 0.45
Cha-F-400163 5347 ChaMARCM-F000719_seg001 Cha-Gal4 F 27030.63 0.54
Cha-F-400205 5661 ChaMARCM-F000930_seg001 Cha-Gal4 F 34852.66 0.48
Gad1-F-200051 6009 GadMARCM-F000194_seg001 Gad1-Gal4 F 37276.49 0.57
Gad1-F-000055 6151 GadMARCM-F000507_seg001 Gad1-Gal4 F 33048.77 0.68
Cha-F-700105 7576 ChaMARCM-F000435_seg001 Cha-Gal4 F 31101.41 0.40
Cha-F-300032 8059 ChaMARCM-F000131_seg001 Cha-Gal4 F 33125.49 0.48
VGlut-F-300502 8768 DvGlutMARCM-F003588_seg001 VGlut-Gal4 F 28221.08 0.54
VGlut-F-600663 9005 DvGlutMARCM-F003549_seg001 VGlut-Gal4 F 36062.64 0.68
VGlut-F-500670 9088 DvGlutMARCM-F003404_seg002 VGlut-Gal4 F 20196.91 0.52
Gad1-F-400107 9718 GadMARCM-F000561_seg001 Gad1-Gal4 F 29746.59 0.48
Gad1-F-600007 10581 GadMARCM-F000099_seg002 Gad1-Gal4 F 28331.16 0.57
Gad1-F-300051 10700 GadMARCM-F000199_seg001 Gad1-Gal4 F 25094.71 0.58
VGlut-F-700242 11186 DvGlutMARCM-F003034_seg001 VGlut-Gal4 F 23917.45 0.55
VGlut-F-400475 12941 DvGlutMARCM-F1976_seg2 VGlut-Gal4 F 20761.89 0.53
VGlut-F-300314 15304 DvGlutMARCM-F1638_seg2 VGlut-Gal4 F 26986.37 0.52
VGlut-F-300331 15390 DvGlutMARCM-F1748_seg1 VGlut-Gal4 F 25796.76 0.57
VGlut-F-200147 15563 DvGlutMARCM-F696-X2_seg1 VGlut-Gal4 F 25780.51 0.55
VGlut-F-400046 15876 DvGlutMARCM-F279-X2_seg1 VGlut-Gal4 F 29375.28 0.62