Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-300582), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
256 Cha-F-000296 I 0.73
13 fru-M-500232 I 0.61
775 VGlut-F-500422 II 0.60
327 Cha-F-100171 I 0.56
818 VGlut-F-400469 I 0.55
443 VGlut-F-500754 II 0.53
490 Cha-F-000064 I 0.51
486 VGlut-F-300556 II 0.51
509 VGlut-F-200536 VII 0.50

Cluster composition

This cluster has 12 neurons. The exemplar of this cluster (VGlut-F-300582) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-300582 6905 DvGlutMARCM-F004060_seg001 VGlut-Gal4 F 9282.22 1.00
VGlut-F-700601 5940 DvGlutMARCM-F004598_seg001 VGlut-Gal4 F 6671.98 0.72
VGlut-F-400805 6702 DvGlutMARCM-F003917_seg001 VGlut-Gal4 F 6395.28 0.72
VGlut-F-200542 7441 DvGlutMARCM-F003893_seg002 VGlut-Gal4 F 6495.49 0.70
VGlut-F-400782 7949 DvGlutMARCM-F003781_seg002 VGlut-Gal4 F 6282.38 0.69
Cha-F-100024 8379 ChaMARCM-F000319_seg001 Cha-Gal4 F 4736.41 0.45
VGlut-F-100308 8839 DvGlutMARCM-F003636_seg001 VGlut-Gal4 F 5908.95 0.66
VGlut-F-300483 9366 DvGlutMARCM-F003198_seg002 VGlut-Gal4 F 6552.81 0.71
VGlut-F-500284 10741 DvGlutMARCM-F1859_seg1 VGlut-Gal4 F 6774.73 0.74
VGlut-F-500241 14302 DvGlutMARCM-F1750_seg1 VGlut-Gal4 F 5615.66 0.55
VGlut-F-400092 16012 DvGlutMARCM-F400-X3_seg2 VGlut-Gal4 F 7039.63 0.75
VGlut-F-200091 16107 DvGlutMARCM-F490-X2_seg2 VGlut-Gal4 F 6405.42 0.69