Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-000154), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
857 TH-F-300062 XII 0.70
215 fru-F-100075 XII 0.66
73 fru-M-100191 XII 0.65
48 fru-M-500155 XII 0.63
240 Gad1-F-600092 XII 0.61
129 fru-M-500019 XII 0.61
31 fru-M-000206 XII 0.60
1037 VGlut-F-000104 XII 0.58
863 TH-F-000022 XII 0.56
851 TH-F-100029 XIV 0.51

Cluster composition

This cluster has 11 neurons. The exemplar of this cluster (VGlut-F-000154) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-000154 16176 DvGlutMARCM-F558_seg1 VGlut-Gal4 F 49679.82 1.00
TH-M-000006 1327 THMARCM-234M_seg1 TH-Gal4 M 38693.34 0.75
fru-M-000003 1858 FruMARCM-M000380_seg001 fru-Gal4 M 34596.06 0.72
TH-M-000040 3340 THMARCM-626M_seg TH-Gal4 M 38635.78 0.76
Cha-F-400187 5491 ChaMARCM-F000813_seg003 Cha-Gal4 F 36996.46 0.75
VGlut-F-300534 7919 DvGlutMARCM-F003762_seg002 VGlut-Gal4 F 38914.56 0.77
VGlut-F-400476 12950 DvGlutMARCM-F1982_seg1 VGlut-Gal4 F 32201.25 0.67
TH-F-000015 13588 THMARCM-519F_seg1 TH-Gal4 F 36210.47 0.73
TH-F-000016 13590 THMARCM-521F_seg1 TH-Gal4 F 38406.23 0.75
VGlut-F-300152 14492 DvGlutMARCM-F765_seg1 VGlut-Gal4 F 29866.17 0.60
VGlut-F-300261 15139 DvGlutMARCM-F1472_seg1 VGlut-Gal4 F 30349.46 0.61