Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-000104), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
1028 VGlut-F-000067 XIV 0.59
877 Trh-F-000012 XIX 0.58
215 fru-F-100075 XII 0.55
31 fru-M-000206 XII 0.54
1046 VGlut-F-000154 XII 0.46

Cluster composition

This cluster has 7 neurons. The exemplar of this cluster (VGlut-F-000104) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-000104 16094 DvGlutMARCM-F478_seg1 VGlut-Gal4 F 52231.01 1.00
fru-M-000163 32 FruMARCM-M002230_seg002 fru-Gal4 M 35131.05 0.71
fru-M-100145 423 FruMARCM-M001538_seg001 fru-Gal4 M 35737.87 0.71
fru-M-200245 881 FruMARCM-M002146_seg001 fru-Gal4 M 37620.38 0.73
VGlut-F-000643 7004 DvGlutMARCM-F004146_seg001 VGlut-Gal4 F 25194.46 0.56
Cha-F-000097 7100 ChaMARCM-F000576_seg001 Cha-Gal4 F 28894.95 0.44
Gad1-F-600040 8408 GadMARCM-F000332_seg001 Gad1-Gal4 F 14111.05 0.35