Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-000521), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
268 Cha-F-200340 X 0.67
903 VGlut-F-000273 X 0.64
876 Trh-F-100023 X 0.61
250 Gad1-F-700054 X 0.54
865 TH-F-000025 X 0.53
200 TH-M-000060 X 0.52

Cluster composition

This cluster has 37 neurons. The exemplar of this cluster (VGlut-F-000521) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-000521 8882 DvGlutMARCM-F003463_seg001 VGlut-Gal4 F 34611.87 1.00
fru-M-700111 692 FruMARCM-M001895_seg002 fru-Gal4 M 13286.88 0.58
Trh-M-600043 3000 TPHMARCM-943M_seg1 Trh-Gal4 M 13061.17 0.53
Gad1-F-800070 4010 GadMARCM-F000624_seg002 Gad1-Gal4 F 26297.51 0.74
Gad1-F-800080 4048 GadMARCM-F000648_seg002 Gad1-Gal4 F 21793.72 0.66
Gad1-F-800085 4089 GadMARCM-F000677_seg001 Gad1-Gal4 F 23815.82 0.69
Cha-F-000314 4245 ChaMARCM-F001330_seg001 Cha-Gal4 F 24360.28 0.67
Cha-F-200341 4308 ChaMARCM-F001372_seg001 Cha-Gal4 F 21051.77 0.59
Cha-F-700181 4450 ChaMARCM-F001492_seg001 Cha-Gal4 F 18649.85 0.65
Cha-F-000171 4946 ChaMARCM-F001049_seg001 Cha-Gal4 F 12431.39 0.56
Cha-F-000175 4951 ChaMARCM-F001051_seg004 Cha-Gal4 F 24197.44 0.60
Cha-F-800028 5378 ChaMARCM-F000743_seg001 Cha-Gal4 F 23910.51 0.69
Cha-F-500127 7098 ChaMARCM-F000574_seg002 Cha-Gal4 F 20062.99 0.66
Cha-F-400125 7119 ChaMARCM-F000591_seg002 Cha-Gal4 F 18515.76 0.63
Cha-F-400092 7250 ChaMARCM-F000422_seg001 Cha-Gal4 F 15140.97 0.49
Cha-F-800014 7531 ChaMARCM-F000379_seg001 Cha-Gal4 F 24648.36 0.74
Cha-F-800024 7657 ChaMARCM-F000488_seg001 Cha-Gal4 F 24594.31 0.69
Cha-F-500114 7735 ChaMARCM-F000543_seg001 Cha-Gal4 F 18298.73 0.62
VGlut-F-500728 7959 DvGlutMARCM-F003789_seg001 VGlut-Gal4 F 26078.29 0.72
Cha-F-400038 8195 ChaMARCM-F000206_seg001 Cha-Gal4 F 17017.48 0.58
VGlut-F-600528 9335 DvGlutMARCM-F003170_seg002 VGlut-Gal4 F 19647.73 0.67
npf-F-500001 9433 npfMARCM-F000022_seg001 npf-GAL4 F 21380.77 0.66
npf-F-500007 9442 npfMARCM-F000032_seg001 npf-GAL4 F 15861.25 0.57
npf-F-400003 9445 npfMARCM-F000035_seg001 npf-GAL4 F 20956.61 0.69
npf-F-300015 9453 npfMARCM-F000041_seg002 npf-GAL4 F 20997.21 0.67
npf-F-300016 9454 npfMARCM-F000041_seg003 npf-GAL4 F 19961.87 0.66
Gad1-F-700013 10636 GadMARCM-F000135_seg003 Gad1-Gal4 F 11129.91 0.52
Gad1-F-800019 11309 GadMARCM-F000282_seg001 Gad1-Gal4 F 16488.60 0.59
Trh-F-000052 12594 TPHMARCM-F001390_seg001 Trh-Gal4 F 11234.62 0.50
Trh-F-900023 13299 TPHMARCM-781F_seg2 Trh-Gal4 F 9581.18 0.46
VGlut-F-100085 14328 DvGlutMARCM-F1011_seg1 VGlut-Gal4 F 15576.33 0.57
VGlut-F-000250 14738 DvGlutMARCM-F996_seg1 VGlut-Gal4 F 26014.95 0.70
VGlut-F-200213 14816 DvGlutMARCM-F1161_seg1 VGlut-Gal4 F 26080.11 0.70
VGlut-F-100152 15076 DvGlutMARCM-F1414_seg1 VGlut-Gal4 F 24475.67 0.71
VGlut-F-200279 15119 DvGlutMARCM-F1452_seg1 VGlut-Gal4 F 24092.42 0.73
VGlut-F-100001 15635 DvGlutMARCM-F048_seg1 VGlut-Gal4 F 23364.94 0.72
VGlut-F-000148 16168 DvGlutMARCM-F549_seg1 VGlut-Gal4 F 19835.33 0.64