Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-000273), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
200 TH-M-000060 X 0.70
865 TH-F-000025 X 0.70
268 Cha-F-200340 X 0.64
876 Trh-F-100023 X 0.63
148 Trh-M-400144 X 0.57

Cluster composition

This cluster has 17 neurons. The exemplar of this cluster (VGlut-F-000273) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-000273 14365 DvGlutMARCM-F1046_seg1 VGlut-Gal4 F 71934.38 1.00
TH-M-300046 3271 THMARCM-465M_seg2 TH-Gal4 M 32018.05 0.42
Gad1-F-200149 4113 GadMARCM-F000698_seg001 Gad1-Gal4 F 38358.62 0.50
Cha-F-000279 4152 ChaMARCM-F001267_seg001 Cha-Gal4 F 33421.98 0.58
Cha-F-200339 4306 ChaMARCM-F001370_seg002 Cha-Gal4 F 41899.16 0.61
Cha-F-300294 5091 ChaMARCM-F001153_seg001 Cha-Gal4 F 44268.81 0.61
Cha-F-000251 5145 ChaMARCM-F001194_seg001 Cha-Gal4 F 39571.58 0.50
Cha-F-300232 5501 ChaMARCM-F000820_seg001 Cha-Gal4 F 42905.44 0.36
Cha-F-300156 7133 ChaMARCM-F000601_seg001 Cha-Gal4 F 42970.72 0.53
Cha-F-600071 7711 ChaMARCM-F000526_seg001 Cha-Gal4 F 33644.01 0.61
Cha-F-200106 7725 ChaMARCM-F000537_seg001 Cha-Gal4 F 35369.04 0.63
Cha-F-400059 8373 ChaMARCM-F000315_seg001 Cha-Gal4 F 38353.85 0.48
TH-F-400015 10484 THMARCM-700F_seg TH-Gal4 F 35518.28 0.39
TH-F-000058 13671 THMARCM-695F-X2_seg2 TH-Gal4 F 40450.37 0.51
VGlut-F-100084 14327 DvGlutMARCM-F1010_seg3 VGlut-Gal4 F 43218.20 0.51
VGlut-F-100129 14906 DvGlutMARCM-F1249_seg1 VGlut-Gal4 F 47095.85 0.57
VGlut-F-000368 15189 DvGlutMARCM-F1518_seg1 VGlut-Gal4 F 47050.82 0.61