Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-700482), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
686 VGlut-F-900065 VII 0.69
509 VGlut-F-200536 VII 0.54
406 fru-F-000053 VII 0.54
852 TH-F-100030 VII 0.46
666 TH-F-200011 IX 0.45

Cluster composition

This cluster has 9 neurons. The exemplar of this cluster (VGlut-F-700482) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-700482 7007 DvGlutMARCM-F004148_seg002 VGlut-Gal4 F 14840.17 1.00
fru-M-500148 444 FruMARCM-M001556_seg001 fru-Gal4 M 9747.03 0.67
fru-M-500192 737 FruMARCM-M001950_seg001 fru-Gal4 M 9477.24 0.66
fru-M-100126 1162 FruMARCM-M001349_seg001 fru-Gal4 M 8503.26 0.56
VGlut-F-400848 6869 DvGlutMARCM-F004033_seg002 VGlut-Gal4 F 8583.53 0.59
VGlut-F-700497 7034 DvGlutMARCM-F004169_seg002 VGlut-Gal4 F 9758.13 0.66
fru-F-600058 7313 FruMARCM-F000952_seg002 fru-Gal4 F 9841.50 0.65
Cha-F-500049 8118 ChaMARCM-F000168_seg001 Cha-Gal4 F 7907.25 0.55
VGlut-F-400251 14597 DvGlutMARCM-F859_seg2 VGlut-Gal4 F 9751.21 0.67