Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-400823), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
425 VGlut-F-500805 VII 0.70
707 VGlut-F-200430 VII 0.69
709 VGlut-F-600463 VII 0.64
964 VGlut-F-200325 XIV 0.61
661 Tdc2-F-000027 VII 0.59
383 VGlut-F-400923 VII 0.55
396 VGlut-F-100240 VII 0.53
113 fru-M-300118 VII 0.52

Cluster composition

This cluster has 17 neurons. The exemplar of this cluster (VGlut-F-400823) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-400823 6798 DvGlutMARCM-F003989_seg001 VGlut-Gal4 F 16559.94 1.00
VGlut-F-700529 6490 DvGlutMARCM-F004268_seg001 VGlut-Gal4 F 9154.04 0.51
VGlut-F-700458 6761 DvGlutMARCM-F003964_seg002 VGlut-Gal4 F 11653.28 0.69
VGlut-F-700506 7048 DvGlutMARCM-F004178_seg001 VGlut-Gal4 F 11700.65 0.69
VGlut-F-600774 7065 DvGlutMARCM-F004194_seg001 VGlut-Gal4 F 10654.76 0.60
VGlut-F-800136 8572 DvGlutMARCM-F003138_seg001 VGlut-Gal4 F 11366.66 0.69
VGlut-F-300498 8960 DvGlutMARCM-F003520_seg001 VGlut-Gal4 F 12038.25 0.72
VGlut-F-700381 8979 DvGlutMARCM-F003536_seg003 VGlut-Gal4 F 11357.67 0.67
VGlut-F-700316 9431 DvGlutMARCM-F003244_seg001 VGlut-Gal4 F 7884.27 0.57
fru-F-500001 11543 FruMARCM-F000200_seg001 fru-Gal4 F 11386.55 0.70
VGlut-F-400654 11680 DvGlutMARCM-F002256_seg001 VGlut-Gal4 F 10050.08 0.48
VGlut-F-600267 11894 DvGlutMARCM-F002434_seg001 VGlut-Gal4 F 11240.71 0.68
VGlut-F-600128 13111 DvGlutMARCM-F2136_seg1 VGlut-Gal4 F 6340.26 0.49
VGlut-F-400214 14514 DvGlutMARCM-F785_seg1 VGlut-Gal4 F 11150.25 0.68
VGlut-F-400336 14867 DvGlutMARCM-F1212_seg1 VGlut-Gal4 F 11680.69 0.70
VGlut-F-400350 14930 DvGlutMARCM-F1272_seg1 VGlut-Gal4 F 11769.18 0.71
VGlut-F-000389 15284 DvGlutMARCM-F1612_seg1 VGlut-Gal4 F 11955.38 0.71