Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-400923), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
397 VGlut-F-200384 VII 0.64
661 Tdc2-F-000027 VII 0.57
442 VGlut-F-400823 VII 0.54
762 VGlut-F-600264 VII 0.51
113 fru-M-300118 VII 0.50

Cluster composition

This cluster has 12 neurons. The exemplar of this cluster (VGlut-F-400923) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-400923 5929 DvGlutMARCM-F004589_seg001 VGlut-Gal4 F 12140.92 1.00
VGlut-F-400806 6703 DvGlutMARCM-F003917_seg002 VGlut-Gal4 F 8517.81 0.72
VGlut-F-700445 6717 DvGlutMARCM-F003928_seg001 VGlut-Gal4 F 8373.93 0.69
VGlut-F-100291 9049 DvGlutMARCM-F003371_seg001 VGlut-Gal4 F 8043.08 0.64
VGlut-F-600176 11737 DvGlutMARCM-F002308_seg001 VGlut-Gal4 F 8639.43 0.71
VGlut-F-600184 11747 DvGlutMARCM-F002318_seg001 VGlut-Gal4 F 8188.47 0.68
Trh-F-300127 12676 TPHMARCM-1002F_seg1 Trh-Gal4 F 8528.05 0.70
VGlut-F-300163 14509 DvGlutMARCM-F782_seg1 VGlut-Gal4 F 9312.62 0.73
VGlut-F-400330 14850 DvGlutMARCM-F1197_seg1 VGlut-Gal4 F 8521.51 0.68
VGlut-F-300123 15558 DvGlutMARCM-F692_seg1 VGlut-Gal4 F 8351.57 0.69
VGlut-F-200008 15609 DvGlutMARCM-F023_seg1 VGlut-Gal4 F 8665.53 0.68
VGlut-F-500054 15897 DvGlutMARCM-F297_seg1 VGlut-Gal4 F 8773.70 0.71