Cluster 429
Part of supercluster II
About
Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-500825), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.
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Credits
Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.
Image processing carried out with unu, CMTK, and Fiji.
Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.
Similar clusters
The most similar clusters to this one are:
| Cluster | Exemplar | Supercluster | Exemplar normalised score |
|---|---|---|---|
| 486 | VGlut-F-300556 | II | 0.54 |
| 670 | Gad1-F-600028 | II | 0.49 |
| 536 | Cha-F-400060 | II | 0.38 |
| 647 | Trh-F-000067 | II | 0.38 |
| 660 | Tdc2-F-200049 | I | 0.30 |
Cluster composition
This cluster has 8 neurons. The exemplar of this cluster (VGlut-F-500825) is drawn in black.
| Neuron | idid | Gene name | Driver | Sex | Raw score | Normalised score |
|---|---|---|---|---|---|---|
| VGlut-F-500825 | 6613 | DvGlutMARCM-F004366_seg002 | VGlut-Gal4 | F | 5239.05 | 1.00 |
| Gad1-F-900055 | 4037 | GadMARCM-F000642_seg001 | Gad1-Gal4 | F | 3346.30 | 0.57 |
| VGlut-F-000625 | 6906 | DvGlutMARCM-F004061_seg001 | VGlut-Gal4 | F | 2689.49 | 0.44 |
| Cha-F-000101 | 7159 | ChaMARCM-F000616_seg002 | Cha-Gal4 | F | 3448.10 | 0.62 |
| Gad1-F-300109 | 9546 | GadMARCM-F000426_seg001 | Gad1-Gal4 | F | 3345.77 | 0.63 |
| Gad1-F-800057 | 9674 | GadMARCM-F000525_seg002 | Gad1-Gal4 | F | 3190.97 | 0.63 |
| Gad1-F-400003 | 10535 | GadMARCM-F000067_seg001 | Gad1-Gal4 | F | 2605.54 | 0.47 |
| Gad1-F-600034 | 11356 | GadMARCM-F000315_seg001 | Gad1-Gal4 | F | 3390.13 | 0.65 |