Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Cha-F-400060), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
486 VGlut-F-300556 II 0.46
429 VGlut-F-500825 II 0.37
678 Gad1-F-200035 II 0.35
670 Gad1-F-600028 II 0.34
1022 VGlut-F-400066 II 0.32

Cluster composition

This cluster has 9 neurons. The exemplar of this cluster (Cha-F-400060) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Cha-F-400060 8380 ChaMARCM-F000320_seg001 Cha-Gal4 F 4179.85 1.00
Gad1-F-000065 4031 GadMARCM-F000637_seg002 Gad1-Gal4 F 2839.98 0.64
Cha-F-200199 4866 ChaMARCM-F000987_seg001 Cha-Gal4 F 2368.74 0.57
Cha-F-300300 5110 ChaMARCM-F001166_seg001 Cha-Gal4 F 1918.82 0.38
Cha-F-100240 5215 ChaMARCM-F001249_seg001 Cha-Gal4 F 2315.03 0.56
Cha-F-200143 5329 ChaMARCM-F000705_seg001 Cha-Gal4 F 2665.18 0.65
Cha-F-200037 8181 ChaMARCM-F000197_seg001 Cha-Gal4 F 2252.64 0.52
Gad1-F-100060 9663 GadMARCM-F000514_seg001 Gad1-Gal4 F 2511.43 0.58
Gad1-F-100008 10721 GadMARCM-F000049_seg001 Gad1-Gal4 F 2464.84 0.55