Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Gad1-F-600028), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
486 VGlut-F-300556 II 0.57
647 Trh-F-000067 II 0.45
429 VGlut-F-500825 II 0.45
940 VGlut-F-400342 II 0.42
494 Cha-F-600033 II 0.36

Cluster composition

This cluster has 10 neurons. The exemplar of this cluster (Gad1-F-600028) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Gad1-F-600028 10526 GadMARCM-F000166_seg001 Gad1-Gal4 F 5364.33 1.00
Cha-F-000335 4340 ChaMARCM-F001398_seg001 Cha-Gal4 F 3355.47 0.63
Cha-F-400180 5466 ChaMARCM-F000799_seg002 Cha-Gal4 F 2579.81 0.46
Cha-F-600016 8052 ChaMARCM-F000125_seg001 Cha-Gal4 F 3401.40 0.63
Cha-F-300031 8058 ChaMARCM-F000130_seg002 Cha-Gal4 F 2252.74 0.44
VGlut-F-500535 8453 DvGlutMARCM-F003052_seg001 VGlut-Gal4 F 2320.94 0.46
Gad1-F-800039 9505 GadMARCM-F000397_seg001 Gad1-Gal4 F 2716.50 0.52
Gad1-F-600014 10588 GadMARCM-F000104_seg003 Gad1-Gal4 F 3013.43 0.51
Gad1-F-400036 11365 GadMARCM-F000321_seg002 Gad1-Gal4 F 2764.80 0.53
VGlut-F-300226 14904 DvGlutMARCM-F1247_seg1 VGlut-Gal4 F 3621.34 0.68