Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Cha-F-200213), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
851 TH-F-100029 XIV 0.60
964 VGlut-F-200325 XIV 0.46
1028 VGlut-F-000067 XIV 0.42
191 TH-M-200018 XIV 0.30
658 Tdc2-F-300026 XIV 0.29

Cluster composition

This cluster has 7 neurons. The exemplar of this cluster (Cha-F-200213) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Cha-F-200213 4987 ChaMARCM-F001081_seg001 Cha-Gal4 F 10853.94 1.00
Cha-F-100322 4373 ChaMARCM-F001429_seg001 Cha-Gal4 F 7005.31 0.68
Gad1-F-600084 9714 GadMARCM-F000556_seg001 Gad1-Gal4 F 6563.16 0.62
Tdc2-F-300044 10197 dTdc2MARCM-F000251_seg001 Tdc2-Gal4 F 7043.94 0.69
Tdc2-F-300045 10199 dTdc2MARCM-F000254_seg001 Tdc2-Gal4 F 6370.33 0.62
Tdc2-F-400022 10288 dTdc-2MARCM-F000156_seg2 Tdc2-Gal4 F 6507.67 0.59
Tdc2-F-400019 10428 dTdc2MARCM-F000143_seg002 Tdc2-Gal4 F 5555.43 0.58