Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Cha-F-100326), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
1048 VGlut-F-000167 XV 0.52
743 fru-F-000002 XV 0.42
736 fru-F-400017 XV 0.39
51 fru-M-000088 XV 0.36
671 Gad1-F-300023 XV 0.35

Cluster composition

This cluster has 9 neurons. The exemplar of this cluster (Cha-F-100326) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Cha-F-100326 4377 ChaMARCM-F001433_seg001 Cha-Gal4 F 7380.22 1.00
Gad1-F-500100 3959 GadMARCM-F000585_seg001 Gad1-Gal4 F 3944.66 0.52
VGlut-F-000662 5842 DvGlutMARCM-F004528_seg001 VGlut-Gal4 F 2947.18 0.37
fru-F-100010 6152 FruMARCM-F000382_seg001 fru-Gal4 F 3588.50 0.52
Cha-F-700111 7585 ChaMARCM-F000441_seg001 Cha-Gal4 F 3037.54 0.50
fru-F-500145 7844 FruMARCM-F000752_seg001 fru-Gal4 F 884.64 0.30
VGlut-F-000520 8881 DvGlutMARCM-F003462_seg001 VGlut-Gal4 F 1477.72 0.31
Gad1-F-500007 10735 GadMARCM-F000060_seg001 Gad1-Gal4 F 3128.31 0.45
fru-F-100004 11524 FruMARCM-F000183_seg001 fru-Gal4 F 3577.15 0.49