Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-100022), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
872 TH-F-100101 IX 0.61
461 Cha-F-900029 XVII 0.60
904 VGlut-F-100092 XVII 0.60
1033 VGlut-F-000081 XVIII 0.60
666 TH-F-200011 IX 0.58
984 VGlut-F-200146 XVII 0.52

Cluster composition

This cluster has 15 neurons. The exemplar of this cluster (VGlut-F-100022) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-100022 15889 DvGlutMARCM-F289-X2_seg2 VGlut-Gal4 F 41126.51 1.00
Trh-M-600108 2000 TPHMARCM-M001698_seg001 Trh-Gal4 M 25066.38 0.50
Trh-M-200113 2240 TPHMARCM-M001727_seg001 Trh-Gal4 M 29060.37 0.55
fru-M-300002 2343 FruMARCM-M000033_seg001 fru-Gal4 M 16302.41 0.44
Gad1-F-600090 3949 GadMARCM-F000579_seg001 Gad1-Gal4 F 26833.84 0.54
Cha-F-000277 4150 ChaMARCM-F001265_seg002 Cha-Gal4 F 23115.20 0.39
Cha-F-300213 5448 ChaMARCM-F000787_seg001 Cha-Gal4 F 17934.26 0.44
Cha-F-400138 7154 ChaMARCM-F000613_seg004 Cha-Gal4 F 21402.72 0.52
Cha-F-200104 7723 ChaMARCM-F000536_seg001 Cha-Gal4 F 16741.73 0.41
VGlut-F-400653 11679 DvGlutMARCM-F002255_seg001 VGlut-Gal4 F 30077.82 0.72
VGlut-F-400655 11681 DvGlutMARCM-F002257_seg001 VGlut-Gal4 F 30710.50 0.71
Trh-F-000048 12590 TPHMARCM-F001386_seg001 Trh-Gal4 F 23418.36 0.56
VGlut-F-000303 14752 DvGlutMARCM-F1103_seg1 VGlut-Gal4 F 26108.06 0.54
VGlut-F-200296 15272 DvGlutMARCM-F1598_seg1 VGlut-Gal4 F 24163.57 0.64
VGlut-F-200053 15688 DvGlutMARCM-F103_seg1 VGlut-Gal4 F 31044.04 0.75