Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-100092), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
1033 VGlut-F-000081 XVIII 0.57
872 TH-F-100101 IX 0.56
666 TH-F-200011 IX 0.52
461 Cha-F-900029 XVII 0.47
949 VGlut-F-000345 XVII 0.46

Cluster composition

This cluster has 13 neurons. The exemplar of this cluster (VGlut-F-100092) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-100092 14372 DvGlutMARCM-F1052_seg1 VGlut-Gal4 F 98368.78 1.00
Trh-M-700039 2782 TPHMARCM-1001M_seg1 Trh-Gal4 M 47956.68 0.44
Trh-M-200014 3449 TPHMARCM-204M_seg1 Trh-Gal4 M 52689.86 0.26
Gad1-F-000058 3986 GadMARCM-F000607_seg001 Gad1-Gal4 F 34655.73 0.50
Cha-F-100177 4926 ChaMARCM-F001035_seg001 Cha-Gal4 F 56464.30 0.60
Cha-F-000256 5177 ChaMARCM-F001216_seg001 Cha-Gal4 F 41171.45 0.53
VGlut-F-200590 5717 DvGlutMARCM-F004425_seg001 VGlut-Gal4 F 45205.09 0.55
Cha-F-100053 7678 ChaMARCM-F000502_seg003 Cha-Gal4 F 69380.32 0.70
Gad1-F-600030 10528 GadMARCM-F000166_seg003 Gad1-Gal4 F 26325.68 0.49
Gad1-F-200078 11324 GadMARCM-F000295_seg001 Gad1-Gal4 F 13227.55 0.33
VGlut-F-000244 14720 DvGlutMARCM-F980_seg1 VGlut-Gal4 F 32225.99 0.52
VGlut-F-300282 15213 DvGlutMARCM-F1539_seg3 VGlut-Gal4 F 69422.00 0.70
VGlut-F-000063 15989 DvGlutMARCM-F378_seg1 VGlut-Gal4 F 54823.31 0.61