Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-400337), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
127 fru-M-700026 V 0.61
712 VGlut-F-900055 V 0.56
460 Cha-F-100064 II 0.52
133 fru-M-700043 I 0.48
776 VGlut-F-500423 IV 0.43

Cluster composition

This cluster has 11 neurons. The exemplar of this cluster (VGlut-F-400337) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-400337 14868 DvGlutMARCM-F1212_seg2 VGlut-Gal4 F 15432.41 1.00
VGlut-F-200011 6073 DvGlutMARCM-F025_seg2 VGlut-Gal4 F 9434.85 0.67
VGlut-F-400795 6684 DvGlutMARCM-F003905_seg002 VGlut-Gal4 F 10945.71 0.71
VGlut-F-400696 9111 DvGlutMARCM-F003417_seg001 VGlut-Gal4 F 9993.44 0.69
VGlut-F-200465 9190 DvGlutMARCM-F003258_seg001 VGlut-Gal4 F 11047.36 0.73
VGlut-F-500531 10218 DvGlutMARCM-F003039_seg001 VGlut-Gal4 F 7422.44 0.59
VGlut-F-000480 11112 DvGlutMARCM-F002978_seg001 VGlut-Gal4 F 9272.26 0.66
VGlut-F-500440 12185 DvGlutMARCM-F002662_seg001 VGlut-Gal4 F 9231.43 0.64
VGlut-F-300353 12880 DvGlutMARCM-F1922_seg1 VGlut-Gal4 F 12094.11 0.66
VGlut-F-200118 15456 DvGlutMARCM-F616_seg1 VGlut-Gal4 F 10954.08 0.72
VGlut-F-200009 15610 DvGlutMARCM-F024_seg1 VGlut-Gal4 F 7857.73 0.58