Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-500423), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
133 fru-M-700043 I 0.32
935 VGlut-F-100111 V 0.30
660 Tdc2-F-200049 I 0.29
971 VGlut-F-200124 IV 0.28
686 VGlut-F-900065 VII 0.26

Cluster composition

This cluster has 6 neurons. The exemplar of this cluster (VGlut-F-500423) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-500423 12024 DvGlutMARCM-F002543_seg001 VGlut-Gal4 F 28609.75 1.00
VGlut-F-500735 6708 DvGlutMARCM-F003922_seg001 VGlut-Gal4 F 14351.27 0.54
Cha-F-700139 7116 ChaMARCM-F000589_seg001 Cha-Gal4 F 17259.69 0.58
VGlut-F-400671 9371 DvGlutMARCM-F003201_seg002 VGlut-Gal4 F 12699.78 0.49
Gad1-F-000034 11414 GadMARCM-F000356_seg002 Gad1-Gal4 F 9922.62 0.46
VGlut-F-200224 14826 DvGlutMARCM-F1169_seg1 VGlut-Gal4 F 17576.72 0.60