Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Trh-F-300061), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
213 Trh-M-400039 XIV 0.70
191 TH-M-200018 XIV 0.64
204 Trh-M-100025 XIV 0.61
1028 VGlut-F-000067 XIV 0.61
387 Tdc2-F-000040 XIV 0.60
667 TH-F-300071 XIV 0.55

Cluster composition

This cluster has 18 neurons. The exemplar of this cluster (Trh-F-300061) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Trh-F-300061 14105 TPHMARCM-464F_seg1 Trh-Gal4 F 11935.91 1.00
Trh-M-500105 926 TPHMARCM-M001450_seg001 Trh-Gal4 M 8062.62 0.63
Trh-M-500178 2083 TPHMARCM-M001584_seg001 Trh-Gal4 M 8359.73 0.69
Trh-M-600111 2217 TPHMARCM-M001708_seg001 Trh-Gal4 M 7145.57 0.45
Trh-M-500198 2224 TPHMARCM-M001714_seg001 Trh-Gal4 M 8123.06 0.69
Trh-M-500103 2682 TPHMARCM-M001448_seg001 Trh-Gal4 M 8213.93 0.72
Trh-M-600078 2730 TPHMARCM-M001495_seg001 Trh-Gal4 M 8620.17 0.73
Trh-M-500137 2734 TPHMARCM-M001502_seg001 Trh-Gal4 M 8035.23 0.67
Cha-F-500061 8178 ChaMARCM-F000195_seg001 Cha-Gal4 F 6926.59 0.60
Gad1-F-200088 11334 GadMARCM-F000302_seg001 Gad1-Gal4 F 6703.00 0.63
Trh-F-600073 12399 TPHMARCM-1196F_seg1 Trh-Gal4 F 8614.46 0.71
Trh-F-600101 12462 TPHMARCM-1250F_seg1 Trh-Gal4 F 7199.20 0.67
Trh-F-700048 12724 TPHMARCM-885F_seg1 Trh-Gal4 F 8561.77 0.71
Trh-F-700022 13244 TPHMARCM-731F_seg1 Trh-Gal4 F 8456.45 0.70
Trh-F-500084 13253 TPHMARCM-740F_seg1 Trh-Gal4 F 8472.63 0.69
Trh-F-500055 14181 TPHMARCM-620F_seg1 Trh-Gal4 F 8548.25 0.70
Trh-F-400063 14200 TPHMARCM-641F_seg1 Trh-Gal4 F 6862.53 0.61
Trh-F-700036 14272 TPHMARCM-820F_seg1 Trh-Gal4 F 8809.47 0.70