Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-300400), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

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Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
662 Tdc2-F-400026 XIII 0.65
11 fru-M-400216 XI 0.43
724 npf-F-300003 XI 0.43
427 VGlut-F-000656 XI 0.32
894 Trh-F-600015 XI 0.28

Cluster composition

This cluster has 2 neurons. The exemplar of this cluster (VGlut-F-300400) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-300400 13162 DvGlutMARCM-F2199_seg1 VGlut-Gal4 F 10250.31 1.00
VGlut-F-200029 15638 DvGlutMARCM-F051_seg1 VGlut-Gal4 F 9363.89 0.84