Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-400523), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
1045 VGlut-F-300086 VI 0.63
353 Cha-F-200264 VI 0.54
1031 VGlut-F-400089 X 0.51
907 VGlut-F-000294 VI 0.51
433 VGlut-F-200543 VI 0.50
200 TH-M-000060 X 0.50

Cluster composition

This cluster has 13 neurons. The exemplar of this cluster (VGlut-F-400523) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-400523 11812 DvGlutMARCM-F002377_seg001 VGlut-Gal4 F 12676.21 1.00
VGlut-F-100239 6111 DvGlutMARCM-F2191_seg1 VGlut-Gal4 F 7794.37 0.62
VGlut-F-300581 6901 DvGlutMARCM-F004058_seg001 VGlut-Gal4 F 6085.87 0.50
VGlut-F-200552 6934 DvGlutMARCM-F004088_seg001 VGlut-Gal4 F 7020.87 0.61
VGlut-F-600428 10782 DvGlutMARCM-F002760_seg001 VGlut-Gal4 F 7060.32 0.62
VGlut-F-600487 10831 DvGlutMARCM-F003018_seg001 VGlut-Gal4 F 7767.62 0.63
VGlut-F-700129 10855 DvGlutMARCM-F002778_seg001 VGlut-Gal4 F 8513.45 0.66
VGlut-F-600206 11772 DvGlutMARCM-F002341_seg002 VGlut-Gal4 F 8121.73 0.63
VGlut-F-500401 11968 DvGlutMARCM-F002501_seg002 VGlut-Gal4 F 7992.77 0.59
VGlut-F-000428 12945 DvGlutMARCM-F1979_seg1 VGlut-Gal4 F 7674.05 0.58
VGlut-F-600113 12946 DvGlutMARCM-F1980_seg1 VGlut-Gal4 F 7599.70 0.64
TH-F-000059 13672 THMARCM-696F_seg TH-Gal4 F 7399.71 0.44
VGlut-F-400297 14358 DvGlutMARCM-F1040_seg1 VGlut-Gal4 F 7668.11 0.60