Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Cha-F-200264), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
433 VGlut-F-200543 VI 0.50
621 Gad1-F-500089 XVII 0.48
836 VGlut-F-100232 VI 0.45
755 VGlut-F-200398 VI 0.44
907 VGlut-F-000294 VI 0.43

Cluster composition

This cluster has 17 neurons. The exemplar of this cluster (Cha-F-200264) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Cha-F-200264 5187 ChaMARCM-F001224_seg001 Cha-Gal4 F 54064.67 1.00
Cha-F-100170 4914 ChaMARCM-F001025_seg002 Cha-Gal4 F 35744.87 0.67
Cha-F-000192 4980 ChaMARCM-F001076_seg001 Cha-Gal4 F 23789.06 0.35
Cha-F-200129 5286 ChaMARCM-F000676_seg002 Cha-Gal4 F 34256.23 0.63
Cha-F-000130 5353 ChaMARCM-F000723_seg001 Cha-Gal4 F 36730.75 0.67
Cha-F-100090 5385 ChaMARCM-F000748_seg002 Cha-Gal4 F 33797.17 0.66
Cha-F-200154 5392 ChaMARCM-F000752_seg001 Cha-Gal4 F 35254.78 0.66
Cha-F-600136 5606 ChaMARCM-F000891_seg002 Cha-Gal4 F 35828.56 0.68
Cha-F-300124 7224 ChaMARCM-F000390_seg002 Cha-Gal4 F 35507.78 0.67
Cha-F-300114 7445 ChaMARCM-F000330_seg001 Cha-Gal4 F 35672.80 0.67
Cha-F-100025 7520 ChaMARCM-F000373_seg001 Cha-Gal4 F 12724.63 0.23
Cha-F-700090 7532 ChaMARCM-F000380_seg001 Cha-Gal4 F 22525.22 0.40
Gad1-F-800055 9672 GadMARCM-F000524_seg002 Gad1-Gal4 F 33949.56 0.65
Gad1-F-200075 11321 GadMARCM-F000293_seg003 Gad1-Gal4 F 36300.72 0.67
VGlut-F-000262 14324 DvGlutMARCM-F1009_seg2 VGlut-Gal4 F 34643.63 0.66
VGlut-F-000298 14409 DvGlutMARCM-F1089_seg1 VGlut-Gal4 F 35229.46 0.67
VGlut-F-000141 16159 DvGlutMARCM-F541_seg1 VGlut-Gal4 F 37763.89 0.70