Cluster 553
Part of supercluster II
About
Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-800228), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.
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Credits
Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.
Image processing carried out with unu, CMTK, and Fiji.
Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.
Similar clusters
The most similar clusters to this one are:
| Cluster | Exemplar | Supercluster | Exemplar normalised score |
|---|---|---|---|
| 486 | VGlut-F-300556 | II | 0.66 |
| 766 | VGlut-F-500387 | II | 0.53 |
| 67 | fru-M-700128 | II | 0.43 |
| 673 | Gad1-F-300033 | II | 0.42 |
| 780 | VGlut-F-800076 | II | 0.38 |
Cluster composition
This cluster has 11 neurons. The exemplar of this cluster (VGlut-F-800228) is drawn in black.
| Neuron | idid | Gene name | Driver | Sex | Raw score | Normalised score |
|---|---|---|---|---|---|---|
| VGlut-F-800228 | 8613 | DvGlutMARCM-F003670_seg002 | VGlut-Gal4 | F | 4396.24 | 1.00 |
| Cha-F-000284 | 4158 | ChaMARCM-F001271_seg001 | Cha-Gal4 | F | 2781.80 | 0.65 |
| VGlut-F-800302 | 5698 | DvGlutMARCM-F004517_seg001 | VGlut-Gal4 | F | 2485.65 | 0.59 |
| Cha-F-600060 | 7612 | ChaMARCM-F000457_seg001 | Cha-Gal4 | F | 2532.55 | 0.57 |
| VGlut-F-000590 | 7942 | DvGlutMARCM-F003776_seg002 | VGlut-Gal4 | F | 2678.25 | 0.62 |
| Cha-F-700069 | 8210 | ChaMARCM-F000214_seg004 | Cha-Gal4 | F | 2890.48 | 0.56 |
| VGlut-F-600667 | 8732 | DvGlutMARCM-F003563_seg001 | VGlut-Gal4 | F | 2582.68 | 0.60 |
| Cha-F-100016 | 10171 | ChaMARCM-F000101_seg001 | Cha-Gal4 | F | 2233.75 | 0.50 |
| Gad1-F-500048 | 11280 | GadMARCM-F000254_seg001 | Gad1-Gal4 | F | 2284.89 | 0.54 |
| VGlut-F-600305 | 12033 | DvGlutMARCM-F002551_seg003 | VGlut-Gal4 | F | 2512.70 | 0.56 |
| VGlut-F-400493 | 13073 | DvGlutMARCM-F2096_seg1 | VGlut-Gal4 | F | 2486.08 | 0.57 |