Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Cha-F-300071), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
59 fru-M-400176 XV 0.55
169 Trh-M-200075 XV 0.41
1048 VGlut-F-000167 XV 0.41
295 fru-F-100054 XV 0.41
328 Cha-F-100175 XV 0.39

Cluster composition

This cluster has 16 neurons. The exemplar of this cluster (Cha-F-300071) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Cha-F-300071 8272 ChaMARCM-F000254_seg001 Cha-Gal4 F 6332.41 1.00
Gad1-F-800069 4009 GadMARCM-F000624_seg001 Gad1-Gal4 F 4306.10 0.63
Cha-F-000375 4465 ChaMARCM-F001504_seg002 Cha-Gal4 F 3890.01 0.58
Cha-F-500095 7500 ChaMARCM-F000363_seg001 Cha-Gal4 F 3527.30 0.57
fru-F-600047 7780 FruMARCM-F000675_seg002 fru-Gal4 F 3653.22 0.58
VGlut-F-800245 7990 DvGlutMARCM-F003812_seg001 VGlut-Gal4 F 3085.62 0.51
Cha-F-600023 8340 ChaMARCM-F000292_seg001 Cha-Gal4 F 3754.72 0.60
Gad1-F-500094 9721 GadMARCM-F000562_seg002 Gad1-Gal4 F 4056.33 0.62
fru-F-300024 9785 FruMARCM-F000305_seg002 fru-Gal4 F 3115.26 0.50
fru-F-100009 9807 FruMARCM-F000368_seg001 fru-Gal4 F 3349.36 0.51
Gad1-F-400062 11408 GadMARCM-F000353_seg003 Gad1-Gal4 F 3515.81 0.55
fru-F-100002 11488 FruMARCM-F000096_seg001 fru-Gal4 F 4067.32 0.64
VGlut-F-100203 12809 DvGlutMARCM-F1857_seg1 VGlut-Gal4 F 3924.38 0.62
VGlut-F-200194 14322 DvGlutMARCM-F1008_seg1 VGlut-Gal4 F 2119.43 0.42
VGlut-F-200219 14821 DvGlutMARCM-F1166_seg1 VGlut-Gal4 F 2221.44 0.45
VGlut-F-200072 15784 DvGlutMARCM-F189-X2_seg2 VGlut-Gal4 F 1719.80 0.41