Cluster 28
Part of supercluster XVII
About
Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (fru-M-700179), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.
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Credits
Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.
Image processing carried out with unu, CMTK, and Fiji.
Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.
Similar clusters
The most similar clusters to this one are:
| Cluster | Exemplar | Supercluster | Exemplar normalised score |
|---|---|---|---|
| 65 | fru-M-000139 | XVII | 0.61 |
| 100 | fru-M-300168 | XVII | 0.52 |
| 282 | Cha-F-100339 | XVII | 0.44 |
| 461 | Cha-F-900029 | XVII | 0.43 |
| 268 | Cha-F-200340 | X | 0.42 |
Cluster composition
This cluster has 9 neurons. The exemplar of this cluster (fru-M-700179) is drawn in black.
| Neuron | idid | Gene name | Driver | Sex | Raw score | Normalised score |
|---|---|---|---|---|---|---|
| fru-M-700179 | 279 | FruMARCM-M002504_seg001 | fru-Gal4 | M | 20352.55 | 1.00 |
| fru-M-000179 | 170 | FruMARCM-M002388_seg003 | fru-Gal4 | M | 14181.16 | 0.65 |
| Trh-M-000092 | 2266 | TPHMARCM-M001753_seg001 | Trh-Gal4 | M | 11549.78 | 0.48 |
| Cha-F-800065 | 3920 | ChaMARCM-F001578_seg001 | Cha-Gal4 | F | 10591.43 | 0.57 |
| Gad1-F-200153 | 4120 | GadMARCM-F000706_seg001 | Gad1-Gal4 | F | 11182.11 | 0.50 |
| VGlut-F-500813 | 6582 | DvGlutMARCM-F004343_seg001 | VGlut-Gal4 | F | 13153.20 | 0.64 |
| VGlut-F-200429 | 12137 | DvGlutMARCM-F002630_seg001 | VGlut-Gal4 | F | 13067.43 | 0.70 |
| VGlut-F-500354 | 13081 | DvGlutMARCM-F2103_seg1 | VGlut-Gal4 | F | 11933.40 | 0.55 |
| VGlut-F-300199 | 14377 | DvGlutMARCM-F1057_seg1 | VGlut-Gal4 | F | 11516.02 | 0.59 |