Cluster 178
Part of supercluster VII
About
Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Trh-M-300111), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.
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Credits
Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.
Image processing carried out with unu, CMTK, and Fiji.
Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.
Similar clusters
The most similar clusters to this one are:
| Cluster | Exemplar | Supercluster | Exemplar normalised score |
|---|---|---|---|
| 807 | Trh-F-400092 | VII | 0.46 |
| 731 | fru-F-100001 | VII | 0.20 |
| 759 | VGlut-F-600257 | III | 0.16 |
| 486 | VGlut-F-300556 | II | 0.02 |
| 686 | VGlut-F-900065 | VII | -0.01 |
Cluster composition
This cluster has 11 neurons. The exemplar of this cluster (Trh-M-300111) is drawn in black.
| Neuron | idid | Gene name | Driver | Sex | Raw score | Normalised score |
|---|---|---|---|---|---|---|
| Trh-M-300111 | 2884 | TPHMARCM-1126M_seg1 | Trh-Gal4 | M | 19612.25 | 1.00 |
| Trh-M-200038 | 2925 | TPHMARCM-860M_seg2 | Trh-Gal4 | M | 11112.71 | 0.59 |
| Trh-M-400047 | 3004 | TPHMARCM-948M_seg1 | Trh-Gal4 | M | 11764.90 | 0.61 |
| Cha-F-600161 | 5146 | ChaMARCM-F001195_seg001 | Cha-Gal4 | F | 11535.73 | 0.57 |
| VGlut-F-400803 | 6699 | DvGlutMARCM-F003914_seg001 | VGlut-Gal4 | F | 11049.74 | 0.58 |
| Cha-F-400100 | 7566 | ChaMARCM-F000430_seg001 | Cha-Gal4 | F | 10185.71 | 0.56 |
| VGlut-F-600217 | 11783 | DvGlutMARCM-F002350_seg001 | VGlut-Gal4 | F | 11045.85 | 0.59 |
| VGlut-F-300380 | 12989 | DvGlutMARCM-F2022_seg1 | VGlut-Gal4 | F | 11702.82 | 0.63 |
| Trh-F-300091 | 14187 | TPHMARCM-625F_seg2 | Trh-Gal4 | F | 10066.30 | 0.58 |
| Trh-F-300113 | 14283 | TPHMARCM-827F_seg1 | Trh-Gal4 | F | 10454.27 | 0.52 |
| VGlut-F-300037 | 15913 | DvGlutMARCM-F310-X2_seg2 | VGlut-Gal4 | F | 12066.12 | 0.54 |