Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Trh-F-400092), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
178 Trh-M-300111 VII 0.25
686 VGlut-F-900065 VII 0.23
755 VGlut-F-200398 VI 0.09
353 Cha-F-200264 VI 0.04
486 VGlut-F-300556 II 0.04

Cluster composition

This cluster has 7 neurons. The exemplar of this cluster (Trh-F-400092) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Trh-F-400092 12688 TPHMARCM-1098F_seg1 Trh-Gal4 F 27937.78 1.00
TH-M-000026 948 THMARCM-590M_seg2 TH-Gal4 M 10464.23 0.11
VGlut-F-400501 6095 DvGlutMARCM-F2126_seg1 VGlut-Gal4 F 14884.65 0.57
VGlut-F-500732 7423 DvGlutMARCM-F003878_seg001 VGlut-Gal4 F 14587.87 0.54
Trh-F-400016 13872 TPHMARCM-141F_seg1 Trh-Gal4 F 13778.43 0.56
Trh-F-300045 14061 TPHMARCM-389F_seg1 Trh-Gal4 F 12233.91 0.45
Trh-F-400066 14216 TPHMARCM-655F_seg1 Trh-Gal4 F 13466.76 0.48