Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-100017), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
661 Tdc2-F-000027 VII 0.75
424 VGlut-F-700531 VII 0.67
397 VGlut-F-200384 VII 0.64
302 fru-F-000090 VII 0.64
133 fru-M-700043 I 0.60
383 VGlut-F-400923 VII 0.60
113 fru-M-300118 VII 0.58

Cluster composition

This cluster has 15 neurons. The exemplar of this cluster (VGlut-F-100017) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-100017 15832 DvGlutMARCM-F241_seg1 VGlut-Gal4 F 16696.61 1.00
fru-M-400158 509 FruMARCM-M001612_seg001 fru-Gal4 M 12420.75 0.65
fru-M-700073 998 FruMARCM-M001179_seg001 fru-Gal4 M 12078.36 0.68
fru-M-200168 1100 FruMARCM-M001282_seg003 fru-Gal4 M 11942.73 0.65
fru-M-100051 1582 FruMARCM-M000652_seg001 fru-Gal4 M 12154.61 0.67
fru-F-400167 4520 FruMARCM-F001628_seg003 fru-Gal4 F 11576.54 0.63
VGlut-F-200588 5708 DvGlutMARCM-F004417_seg004 VGlut-Gal4 F 11611.16 0.73
VGlut-F-400914 5816 DvGlutMARCM-F004509_seg002 VGlut-Gal4 F 12382.94 0.73
Cha-F-200056 8246 ChaMARCM-F000238_seg003 Cha-Gal4 F 12429.41 0.69
VGlut-F-200420 11898 DvGlutMARCM-F002437_seg001 VGlut-Gal4 F 12372.24 0.73
VGlut-F-200364 12994 DvGlutMARCM-F2026_seg2 VGlut-Gal4 F 11628.14 0.65
VGlut-F-500121 14608 DvGlutMARCM-F869_seg1 VGlut-Gal4 F 12583.54 0.76
VGlut-F-500165 15101 DvGlutMARCM-F1436_seg1 VGlut-Gal4 F 12043.99 0.64
VGlut-F-000360 15120 DvGlutMARCM-F1453_seg1 VGlut-Gal4 F 11927.68 0.69
VGlut-F-400043 15841 DvGlutMARCM-F248_seg1 VGlut-Gal4 F 11991.75 0.40